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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA063129
Pigment epithelial cells
Not detected
Photoreceptor cells
Medium
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 679.8
Min nTPM: 90.4
Std nTPM: 109.1
Median nTPM: 0.0
386_1
76 years, male
679.8
350_1
84 years, female
642.9
163_1
78 years, male
597.0
379_1
60 years, male
592.2
319_1
81 years, male
588.3
243_1
75 years, male
583.7
246_1
77 years, male
568.4
389_1
86 years, female
566.6
351_1
91 years, male
562.1
377_1
82 years, female
553.7
349_1
83 years, male
547.4
4_1
88 years, female
531.6
173_1
67 years, male
521.5
384_1
83 years, male
517.6
406_1
79 years, male
510.2
425_1
59 years, female
509.7
447_1
81 years, male
497.4
6_1
73 years, female
496.3
321_1
62 years, female
491.7
177_1
74 years, male
491.2
352_1
62 years, male
489.6
375_1
74 years, female
486.8
347_1
72 years, male
484.7
356_1
87 years, female
466.9
229_1
69 years, female
457.8
318_1
68 years, male
444.8
18_1
88 years, male
442.5
217_1
76 years, male
440.2
292_1
71 years, male
438.2
218_1
71 years, female
434.2
139_1
64 years, female
432.5
468_1
89 years, male
432.5
354_1
81 years, female
430.9
452_1
88 years, female
430.7
189_1
76 years, male
429.4
335_1
73 years, female
429.3
254_1
77 years, female
424.2
35_1
74 years, female
424.1
153_1
70 years, female
424.0
376_1
75 years, female
423.3
99_1
64 years, male
418.0
394_1
75 years, female
412.7
355_1
70 years, female
412.6
115_1
83 years, male
412.0
404_1
82 years, female
411.1
322_1
76 years, male
410.8
172_1
72 years, female
410.0
9_1
66 years, female
409.8
503_1
68 years, male
408.4
295_1
61 years, female
407.9
396_1
62 years, male
406.1
109_1
81 years, female
406.0
265_1
87 years, male
405.7
517_1
88 years, male
400.0
120_1
70 years, female
397.8
237_1
82 years, male
393.4
2_1
77 years, female
390.5
17_1
71 years, male
383.1
251_1
78 years, male
380.6
286_1
68 years, female
380.0
526_1
61 years, male
378.1
311_1
78 years, male
374.2
264_1
73 years, female
373.9
315_1
62 years, female
371.4
506_1
65 years, male
363.9
414_1
84 years, female
363.5
126_1
63 years, male
357.9
266_1
85 years, male
356.4
348_1
84 years, male
354.7
137_1
83 years, male
349.2
162_1
79 years, female
343.1
293_1
68 years, female
338.7
413_1
59 years, female
334.3
89_1
63 years, male
330.5
316_1
62 years, male
327.1
119_1
70 years, female
321.6
142_1
61 years, female
320.7
324_1
76 years, male
320.5
317_1
60 years, male
318.6
480_1
63 years, male
318.5
518_1
75 years, female
314.4
314_1
67 years, male
312.5
320_1
89 years, female
306.5
291_1
76 years, male
302.8
42_1
85 years, male
302.1
405_1
91 years, male
300.5
313_1
79 years, female
294.3
353_1
82 years, female
290.8
43_1
64 years, female
288.0
117_1
61 years, male
286.1
81_1
67 years, male
277.4
415_1
77 years, female
273.2
145_1
84 years, male
272.7
501_1
88 years, male
255.8
149_1
88 years, male
242.7
499_1
55 years, female
234.6
466_1
57 years, female
233.8
288_1
66 years, female
226.2
41_1
94 years, female
225.6
32_1
67 years, male
224.9
490_1
67 years, female
215.7
491_1
89 years, female
205.1
307_1
66 years, female
181.1
308_1
70 years, female
134.9
495_1
57 years, female
90.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.