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PDZD11
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:66.6 nTPM
HPA:66.6 nTPM
GTEx:56.8 nTPM
FANTOM5:55.2 Scaled Tags Per Million
Pig:35.1 nTPM
Mouse:58.9 nTPM
Allen mouse:13.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003972
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 66.6
Sample id Sample description nTPM
Hippocampus
nTPM: 66.6
1898 Male, age 80, left hemisphere 68.6
2529 Female, age 94, left hemisphere 67.8
1855 Male, age 76, left hemisphere 66.3
2148 Female, age 91, left hemisphere 66.2
2621 Female, age 67, right hemisphere 65.5
1911 Female, age 85, right hemisphere 65.3
Dentate gyrus
nTPM: 65.1
1927 Female, age 91, both hemispheres 66.6
2010 Male, age 76, both hemispheres 66.4
2246 Female, age 85, both hemispheres 66.0
2528 Male, age 74, both hemispheres 65.7
2530 Female, age 94, left hemisphere 63.7
2531 Female, age 67, both hemispheres 62.2
Entorhinal gyrus
nTPM: 64.3
1938 Female, age 85, left hemisphere 66.7
2117 Female, age 91, right hemisphere 65.5
2764 Male, age 80, right hemisphere 65.4
1787 Male, age 76, left hemisphere 64.3
2686 Male, age 75, right hemisphere 62.2
2613 Female, age 94, left hemisphere 61.5
Hippocampus, CA1
nTPM: 66.2
2749 Male, age 80, left hemisphere 70.2
2527 Male, age 74, both hemispheres 67.7
1873 Female, age 85, both hemispheres 65.3
2045 Male, age 76, both hemispheres 64.0
2082 Female, age 91, right hemisphere 63.7
Hippocampus, CA2
nTPM: 65.9
1892 Male, age 76, both hemispheres 68.8
2249 Male, age 74, both hemispheres 67.9
1963 Male, age 80, left hemisphere 66.7
2113 Female, age 91, right hemisphere 64.6
2437 Female, age 94, left hemisphere 64.4
1940 Female, age 85, left hemisphere 63.1
Hippocampus, CA3
nTPM: 66.0
2436 Male, age 74, both hemispheres 69.7
2137 Male, age 80, left hemisphere 68.4
1867 Male, age 76, both hemispheres 67.6
1891 Female, age 85, both hemispheres 64.4
2620 Female, age 94, left hemisphere 64.2
2861 Female, age 67, both hemispheres 61.3
Parahippocampal cortex
nTPM: 65.5
1850 Male, age 80, both hemispheres 66.8
2250 Female, age 67, right hemisphere 66.8
2245 Female, age 91, both hemispheres 66.4
2692 Male, age 74, both hemispheres 65.8
1933 Female, age 85, both hemispheres 65.4
1990 Female, age 91, right hemisphere 65.3
2622 Female, age 67, right hemisphere 65.0
2018 Male, age 76, both hemispheres 64.7
2532 Female, age 72, left hemisphere 64.6
2693 Female, age 94, both hemispheres 64.4
Perirhinal gyrus
nTPM: 66.0
1847 Female, age 91, left hemisphere 67.9
1841 Female, age 85, right hemisphere 67.1
2521 Female, age 94, right hemisphere 65.8
1794 Male, age 80, right hemisphere 65.6
2848 Male, age 76, right hemisphere 63.4
Subiculum
nTPM: 65.7
2619 Male, age 74, both hemispheres 67.3
1901 Male, age 80, both hemispheres 66.5
2438 Female, age 94, left hemisphere 65.8
1977 Female, age 85, both hemispheres 65.5
2729 Female, age 91, right hemisphere 65.2
2042 Male, age 76, both hemispheres 63.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.8
Samples: 197

Max nTPM: 124.3
Min nTPM: 24.3
Std nTPM: 16.4
Median nTPM: 54.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 124.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 122.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 112.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 106.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 103.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 92.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 92.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 87.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 87.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 86.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 84.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.2
FF:10169-103B7 60 years, female 68.0
FF:10153-102I9 76 years, female 42.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.6
Samples: 4

Max nTPM: 44.2
Min nTPM: 24.6
Sample A Female 44.2
Sample B Female 30.9
Sample C Male 34.6
Sample D Male 24.6
Entorhinal cortex
nTPM: 25.2
Samples: 4

Max nTPM: 28.7
Min nTPM: 19.6
Sample A Female 28.7
Sample B Female 24.2
Sample C Male 28.2
Sample D Male 19.6
Subiculum
nTPM: 30.1
Samples: 4

Max nTPM: 37.3
Min nTPM: 24.6
Sample A Female 37.3
Sample B Female 28.3
Sample C Male 30.2
Sample D Male 24.6
Ventral hippocampus
nTPM: 35.1
Samples: 4

Max nTPM: 43.0
Min nTPM: 25.0
Sample A Female 36.9
Sample B Female 25.0
Sample C Male 43.0
Sample D Male 35.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.7
Samples: 4

Max nTPM: 64.7
Min nTPM: 53.9
Sample A Male 53.9
Sample B Male 58.3
Sample C Female 64.7
Sample D Female 53.9
Hippocampal formation
nTPM: 58.9
Samples: 4

Max nTPM: 65.4
Min nTPM: 53.4
Sample A Male 65.4
Sample B Male 53.4
Sample C Female 58.0
Sample D Female 58.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.4
545089 Antisense, RP_040810_02_H08, Mouse strain C57BL/6J (56 days, male) 13.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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