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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:29.1 nTPM
HPA:29.1 nTPM
GTEx:39.9 nTPM
FANTOM5:104.5 Scaled Tags Per Million
Pig:10.9 nTPM
Mouse:48.7 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024648
Glial cells Low
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.1
Sample id Sample description nTPM
Hippocampus
nTPM: 28.5
1898 Male, age 80, left hemisphere 32.8
1855 Male, age 76, left hemisphere 29.5
2621 Female, age 67, right hemisphere 28.4
1911 Female, age 85, right hemisphere 28.1
2148 Female, age 91, left hemisphere 26.5
2529 Female, age 94, left hemisphere 25.8
Dentate gyrus
nTPM: 27.7
1927 Female, age 91, both hemispheres 29.8
2246 Female, age 85, both hemispheres 28.9
2530 Female, age 94, left hemisphere 27.6
2528 Male, age 74, both hemispheres 27.2
2010 Male, age 76, both hemispheres 26.7
2531 Female, age 67, both hemispheres 25.9
Entorhinal gyrus
nTPM: 27.9
1938 Female, age 85, left hemisphere 29.2
2613 Female, age 94, left hemisphere 28.3
2117 Female, age 91, right hemisphere 27.8
2764 Male, age 80, right hemisphere 27.6
2686 Male, age 75, right hemisphere 27.4
1787 Male, age 76, left hemisphere 26.9
Hippocampus, CA1
nTPM: 29.0
2749 Male, age 80, left hemisphere 31.2
1873 Female, age 85, both hemispheres 29.7
2527 Male, age 74, both hemispheres 29.0
2045 Male, age 76, both hemispheres 27.6
2082 Female, age 91, right hemisphere 27.4
Hippocampus, CA2
nTPM: 28.8
1892 Male, age 76, both hemispheres 31.2
1963 Male, age 80, left hemisphere 29.9
2249 Male, age 74, both hemispheres 28.8
2437 Female, age 94, left hemisphere 28.2
1940 Female, age 85, left hemisphere 27.6
2113 Female, age 91, right hemisphere 27.0
Hippocampus, CA3
nTPM: 27.9
2137 Male, age 80, left hemisphere 30.2
1867 Male, age 76, both hemispheres 28.9
1891 Female, age 85, both hemispheres 28.6
2436 Male, age 74, both hemispheres 28.1
2861 Female, age 67, both hemispheres 26.0
2620 Female, age 94, left hemisphere 25.8
Parahippocampal cortex
nTPM: 28.2
1850 Male, age 80, both hemispheres 30.4
1933 Female, age 85, both hemispheres 30.1
2245 Female, age 91, both hemispheres 29.2
2250 Female, age 67, right hemisphere 29.1
1990 Female, age 91, right hemisphere 28.2
2532 Female, age 72, left hemisphere 27.3
2622 Female, age 67, right hemisphere 27.1
2693 Female, age 94, both hemispheres 27.0
2692 Male, age 74, both hemispheres 26.9
2018 Male, age 76, both hemispheres 26.6
Perirhinal gyrus
nTPM: 29.1
1847 Female, age 91, left hemisphere 31.2
1794 Male, age 80, right hemisphere 30.0
1841 Female, age 85, right hemisphere 29.2
2848 Male, age 76, right hemisphere 27.6
2521 Female, age 94, right hemisphere 27.5
Subiculum
nTPM: 27.1
1901 Male, age 80, both hemispheres 29.6
1977 Female, age 85, both hemispheres 28.3
2619 Male, age 74, both hemispheres 27.1
2042 Male, age 76, both hemispheres 26.9
2729 Female, age 91, right hemisphere 26.7
2438 Female, age 94, left hemisphere 24.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.9
Samples: 197

Max nTPM: 98.6
Min nTPM: 16.4
Std nTPM: 10.8
Median nTPM: 38.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 98.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 76.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 71.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 67.0
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 65.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 60.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 60.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 59.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 59.2
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 59.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 58.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 104.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 104.5
FF:10169-103B7 60 years, female 134.9
FF:10153-102I9 76 years, female 74.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.9
Samples: 4

Max nTPM: 12.4
Min nTPM: 9.8
Sample A Female 12.4
Sample B Female 10.7
Sample C Male 10.7
Sample D Male 9.8
Entorhinal cortex
nTPM: 10.5
Samples: 4

Max nTPM: 11.7
Min nTPM: 9.4
Sample A Female 10.2
Sample B Female 11.7
Sample C Male 10.6
Sample D Male 9.4
Subiculum
nTPM: 10.5
Samples: 4

Max nTPM: 12.5
Min nTPM: 9.6
Sample A Female 12.5
Sample B Female 9.6
Sample C Male 9.8
Sample D Male 10.0
Ventral hippocampus
nTPM: 9.3
Samples: 4

Max nTPM: 9.7
Min nTPM: 8.8
Sample A Female 9.7
Sample B Female 9.1
Sample C Male 8.8
Sample D Male 9.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 48.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.3
Samples: 4

Max nTPM: 51.2
Min nTPM: 37.8
Sample A Male 41.7
Sample B Male 51.2
Sample C Female 46.4
Sample D Female 37.8
Hippocampal formation
nTPM: 48.8
Samples: 4

Max nTPM: 52.1
Min nTPM: 45.7
Sample A Male 52.1
Sample B Male 46.8
Sample C Female 45.7
Sample D Female 50.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
68924431 Antisense, RP_050303_02_D01, Mouse strain C57BL/6J (56 days, male) 1.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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