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HSPH1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:184.9 nTPM
HPA:184.9 nTPM
GTEx:129.8 nTPM
FANTOM5:175.9 Scaled Tags Per Million
Pig:121.4 nTPM
Mouse:155.6 nTPM
Allen mouse:19.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028675Antibody CAB002060
Glial cells Not detectedLow
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 184.9
Sample id Sample description nTPM
Hippocampus
nTPM: 174.9
1898 Male, age 80, left hemisphere 182.5
2529 Female, age 94, left hemisphere 180.5
1855 Male, age 76, left hemisphere 176.2
1911 Female, age 85, right hemisphere 172.1
2621 Female, age 67, right hemisphere 171.4
2148 Female, age 91, left hemisphere 166.8
Dentate gyrus
nTPM: 175.5
2010 Male, age 76, both hemispheres 182.6
1927 Female, age 91, both hemispheres 181.5
2246 Female, age 85, both hemispheres 176.9
2530 Female, age 94, left hemisphere 174.3
2528 Male, age 74, both hemispheres 172.6
2531 Female, age 67, both hemispheres 165.0
Entorhinal gyrus
nTPM: 171.1
1938 Female, age 85, left hemisphere 185.4
2764 Male, age 80, right hemisphere 173.1
1787 Male, age 76, left hemisphere 172.2
2686 Male, age 75, right hemisphere 169.1
2117 Female, age 91, right hemisphere 165.3
2613 Female, age 94, left hemisphere 161.5
Hippocampus, CA1
nTPM: 184.9
2749 Male, age 80, left hemisphere 201.7
2045 Male, age 76, both hemispheres 188.6
1873 Female, age 85, both hemispheres 187.3
2527 Male, age 74, both hemispheres 175.1
2082 Female, age 91, right hemisphere 171.8
Hippocampus, CA2
nTPM: 179.0
1892 Male, age 76, both hemispheres 196.6
1963 Male, age 80, left hemisphere 180.5
2249 Male, age 74, both hemispheres 177.5
1940 Female, age 85, left hemisphere 177.1
2113 Female, age 91, right hemisphere 171.4
2437 Female, age 94, left hemisphere 170.6
Hippocampus, CA3
nTPM: 180.5
2137 Male, age 80, left hemisphere 202.1
1867 Male, age 76, both hemispheres 197.4
2436 Male, age 74, both hemispheres 174.8
1891 Female, age 85, both hemispheres 173.0
2620 Female, age 94, left hemisphere 170.2
2861 Female, age 67, both hemispheres 165.5
Parahippocampal cortex
nTPM: 176.7
1850 Male, age 80, both hemispheres 187.2
1933 Female, age 85, both hemispheres 184.6
2250 Female, age 67, right hemisphere 182.6
2018 Male, age 76, both hemispheres 182.5
1990 Female, age 91, right hemisphere 177.6
2532 Female, age 72, left hemisphere 176.7
2245 Female, age 91, both hemispheres 175.5
2622 Female, age 67, right hemisphere 168.0
2693 Female, age 94, both hemispheres 166.6
2692 Male, age 74, both hemispheres 165.3
Perirhinal gyrus
nTPM: 184.4
1847 Female, age 91, left hemisphere 196.2
1841 Female, age 85, right hemisphere 194.4
1794 Male, age 80, right hemisphere 183.3
2848 Male, age 76, right hemisphere 178.3
2521 Female, age 94, right hemisphere 169.7
Subiculum
nTPM: 175.3
2042 Male, age 76, both hemispheres 185.8
1901 Male, age 80, both hemispheres 182.7
1977 Female, age 85, both hemispheres 178.5
2438 Female, age 94, left hemisphere 171.4
2619 Male, age 74, both hemispheres 168.4
2729 Female, age 91, right hemisphere 165.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 129.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 129.8
Samples: 197

Max nTPM: 1507.5
Min nTPM: 21.0
Std nTPM: 135.6
Median nTPM: 102.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 1507.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 808.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 525.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 444.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 398.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 395.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 390.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 388.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 343.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 321.8
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 302.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 175.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 175.9
FF:10153-102I9 76 years, female 187.5
FF:10169-103B7 60 years, female 164.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 121.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 100.3
Samples: 4

Max nTPM: 125.3
Min nTPM: 75.4
Sample A Female 125.3
Sample B Female 105.3
Sample C Male 95.1
Sample D Male 75.4
Entorhinal cortex
nTPM: 121.4
Samples: 4

Max nTPM: 135.2
Min nTPM: 109.8
Sample A Female 121.3
Sample B Female 135.2
Sample C Male 119.2
Sample D Male 109.8
Subiculum
nTPM: 91.4
Samples: 4

Max nTPM: 107.4
Min nTPM: 79.1
Sample A Female 107.4
Sample B Female 79.1
Sample C Male 84.7
Sample D Male 94.3
Ventral hippocampus
nTPM: 86.3
Samples: 4

Max nTPM: 111.8
Min nTPM: 62.6
Sample A Female 91.5
Sample B Female 62.6
Sample C Male 79.1
Sample D Male 111.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 155.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 140.4
Samples: 4

Max nTPM: 158.0
Min nTPM: 122.0
Sample A Male 122.0
Sample B Male 144.8
Sample C Female 136.7
Sample D Female 158.0
Hippocampal formation
nTPM: 155.6
Samples: 4

Max nTPM: 185.5
Min nTPM: 136.4
Sample A Male 136.4
Sample B Male 153.6
Sample C Female 185.5
Sample D Female 146.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.2
69735126 Antisense, RP_050503_02_B06, Mouse strain C57BL/6J (56 days, male) 19.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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