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PAIP2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:107.8 nTPM
HPA:107.8 nTPM
GTEx:114.7 nTPM
FANTOM5:188.4 Scaled Tags Per Million
Pig:173.3 nTPM
Mouse:212.7 nTPM
Allen mouse:16.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035945Antibody HPA056766Antibody CAB037212
Glial cells Not detectedNot detectedMedium
Neuronal cells MediumLowHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 107.8
Sample id Sample description nTPM
Hippocampus
nTPM: 101.2
1898 Male, age 80, left hemisphere 108.5
2621 Female, age 67, right hemisphere 103.3
2529 Female, age 94, left hemisphere 103.0
1911 Female, age 85, right hemisphere 100.0
1855 Male, age 76, left hemisphere 99.8
2148 Female, age 91, left hemisphere 92.4
Dentate gyrus
nTPM: 97.8
1927 Female, age 91, both hemispheres 105.7
2010 Male, age 76, both hemispheres 104.6
2528 Male, age 74, both hemispheres 98.9
2246 Female, age 85, both hemispheres 98.0
2530 Female, age 94, left hemisphere 92.5
2531 Female, age 67, both hemispheres 87.3
Entorhinal gyrus
nTPM: 96.4
1938 Female, age 85, left hemisphere 102.7
2764 Male, age 80, right hemisphere 99.6
1787 Male, age 76, left hemisphere 99.2
2117 Female, age 91, right hemisphere 98.7
2613 Female, age 94, left hemisphere 89.4
2686 Male, age 75, right hemisphere 89.0
Hippocampus, CA1
nTPM: 101.0
2749 Male, age 80, left hemisphere 106.3
2527 Male, age 74, both hemispheres 105.4
1873 Female, age 85, both hemispheres 103.6
2045 Male, age 76, both hemispheres 95.8
2082 Female, age 91, right hemisphere 94.1
Hippocampus, CA2
nTPM: 103.4
2249 Male, age 74, both hemispheres 114.8
1892 Male, age 76, both hemispheres 113.3
1963 Male, age 80, left hemisphere 102.0
1940 Female, age 85, left hemisphere 98.8
2437 Female, age 94, left hemisphere 97.1
2113 Female, age 91, right hemisphere 94.3
Hippocampus, CA3
nTPM: 97.6
2436 Male, age 74, both hemispheres 106.7
1867 Male, age 76, both hemispheres 105.4
1891 Female, age 85, both hemispheres 104.4
2137 Male, age 80, left hemisphere 99.2
2620 Female, age 94, left hemisphere 87.0
2861 Female, age 67, both hemispheres 82.7
Parahippocampal cortex
nTPM: 100.4
1850 Male, age 80, both hemispheres 112.9
1990 Female, age 91, right hemisphere 105.7
2250 Female, age 67, right hemisphere 101.9
1933 Female, age 85, both hemispheres 101.7
2532 Female, age 72, left hemisphere 101.7
2245 Female, age 91, both hemispheres 98.9
2018 Male, age 76, both hemispheres 98.8
2693 Female, age 94, both hemispheres 97.9
2692 Male, age 74, both hemispheres 95.5
2622 Female, age 67, right hemisphere 89.4
Perirhinal gyrus
nTPM: 107.8
1841 Female, age 85, right hemisphere 111.9
1847 Female, age 91, left hemisphere 110.3
1794 Male, age 80, right hemisphere 110.0
2521 Female, age 94, right hemisphere 104.8
2848 Male, age 76, right hemisphere 101.9
Subiculum
nTPM: 101.8
2438 Female, age 94, left hemisphere 110.2
1901 Male, age 80, both hemispheres 104.4
1977 Female, age 85, both hemispheres 103.0
2619 Male, age 74, both hemispheres 99.9
2042 Male, age 76, both hemispheres 97.1
2729 Female, age 91, right hemisphere 95.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 114.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 114.7
Samples: 197

Max nTPM: 210.9
Min nTPM: 55.9
Std nTPM: 28.4
Median nTPM: 113.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 210.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 210.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 183.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 180.8
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 175.0
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 171.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 170.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 169.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 169.2
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 166.4
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 165.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 188.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 188.4
FF:10169-103B7 60 years, female 198.8
FF:10153-102I9 76 years, female 178.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 173.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 173.3
Samples: 4

Max nTPM: 220.5
Min nTPM: 133.3
Sample A Female 220.5
Sample B Female 158.0
Sample C Male 181.3
Sample D Male 133.3
Entorhinal cortex
nTPM: 148.0
Samples: 4

Max nTPM: 170.8
Min nTPM: 123.6
Sample A Female 139.4
Sample B Female 170.8
Sample C Male 158.2
Sample D Male 123.6
Subiculum
nTPM: 169.9
Samples: 4

Max nTPM: 213.7
Min nTPM: 149.5
Sample A Female 213.7
Sample B Female 161.9
Sample C Male 154.3
Sample D Male 149.5
Ventral hippocampus
nTPM: 157.4
Samples: 4

Max nTPM: 175.4
Min nTPM: 138.9
Sample A Female 175.4
Sample B Female 138.9
Sample C Male 167.0
Sample D Male 148.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 212.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 189.3
Samples: 4

Max nTPM: 218.3
Min nTPM: 172.2
Sample A Male 180.5
Sample B Male 186.3
Sample C Female 218.3
Sample D Female 172.2
Hippocampal formation
nTPM: 212.7
Samples: 4

Max nTPM: 237.1
Min nTPM: 201.3
Sample A Male 237.1
Sample B Male 201.3
Sample C Female 202.8
Sample D Female 209.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.3
357095 Antisense, RP_040617_02_A11, Mouse strain C57BL/6J (56 days, male) 17.8
323175 Antisense, RP_040617_02_A11, Mouse strain C57BL/6J (56 days, male) 16.1
77620339 Antisense, RP_070205_01_B12, Mouse strain C57BL/6J (56 days, male) 14.8
77869857 Antisense, RP_070205_01_B12, Mouse strain C57BL/6J (56 days, male) 10.9

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.