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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
RNA expressioni
Consensus:31.0 nTPM
HPA:31.0 nTPM
GTEx:43.0 nTPM
FANTOM5:35.8 Scaled Tags Per Million
Pig:8.0 nTPM
Mouse:47.2 nTPM
Allen mouse:4.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA065646Antibody CAB004211
Glial cells Not detectedHigh
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.0
Sample id Sample description nTPM
Hippocampus
nTPM: 31.0
1898 Male, age 80, left hemisphere 33.3
2621 Female, age 67, right hemisphere 31.5
1911 Female, age 85, right hemisphere 30.6
1855 Male, age 76, left hemisphere 30.4
2529 Female, age 94, left hemisphere 30.1
2148 Female, age 91, left hemisphere 30.0
Dentate gyrus
nTPM: 30.6
2530 Female, age 94, left hemisphere 35.2
2010 Male, age 76, both hemispheres 32.5
1927 Female, age 91, both hemispheres 31.0
2531 Female, age 67, both hemispheres 29.3
2246 Female, age 85, both hemispheres 28.1
2528 Male, age 74, both hemispheres 27.4
Entorhinal gyrus
nTPM: 31.0
2686 Male, age 75, right hemisphere 32.6
1938 Female, age 85, left hemisphere 31.2
2117 Female, age 91, right hemisphere 31.1
2613 Female, age 94, left hemisphere 30.9
2764 Male, age 80, right hemisphere 30.3
1787 Male, age 76, left hemisphere 29.6
Hippocampus, CA1
nTPM: 29.5
2749 Male, age 80, left hemisphere 31.8
1873 Female, age 85, both hemispheres 31.0
2045 Male, age 76, both hemispheres 29.4
2527 Male, age 74, both hemispheres 28.7
2082 Female, age 91, right hemisphere 26.4
Hippocampus, CA2
nTPM: 30.9
1963 Male, age 80, left hemisphere 36.6
1892 Male, age 76, both hemispheres 31.8
1940 Female, age 85, left hemisphere 30.8
2437 Female, age 94, left hemisphere 29.4
2249 Male, age 74, both hemispheres 29.2
2113 Female, age 91, right hemisphere 27.4
Hippocampus, CA3
nTPM: 28.8
1867 Male, age 76, both hemispheres 30.8
1891 Female, age 85, both hemispheres 30.0
2861 Female, age 67, both hemispheres 30.0
2137 Male, age 80, left hemisphere 28.6
2620 Female, age 94, left hemisphere 28.0
2436 Male, age 74, both hemispheres 25.3
Parahippocampal cortex
nTPM: 29.7
2532 Female, age 72, left hemisphere 31.0
1850 Male, age 80, both hemispheres 30.9
1990 Female, age 91, right hemisphere 30.6
2018 Male, age 76, both hemispheres 30.5
2622 Female, age 67, right hemisphere 30.4
1933 Female, age 85, both hemispheres 29.9
2692 Male, age 74, both hemispheres 29.1
2245 Female, age 91, both hemispheres 28.9
2693 Female, age 94, both hemispheres 28.3
2250 Female, age 67, right hemisphere 27.1
Perirhinal gyrus
nTPM: 29.2
2848 Male, age 76, right hemisphere 30.0
1841 Female, age 85, right hemisphere 29.8
1794 Male, age 80, right hemisphere 29.3
1847 Female, age 91, left hemisphere 29.0
2521 Female, age 94, right hemisphere 28.1
Subiculum
nTPM: 29.9
1901 Male, age 80, both hemispheres 31.2
2042 Male, age 76, both hemispheres 30.6
1977 Female, age 85, both hemispheres 30.3
2438 Female, age 94, left hemisphere 30.1
2729 Female, age 91, right hemisphere 29.5
2619 Male, age 74, both hemispheres 27.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.0
Samples: 197

Max nTPM: 106.0
Min nTPM: 15.6
Std nTPM: 13.5
Median nTPM: 40.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 106.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 91.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 89.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 84.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 76.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 76.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 74.5
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 74.1
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 71.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 69.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 69.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.8
FF:10153-102I9 76 years, female 44.4
FF:10169-103B7 60 years, female 27.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 7.9
Samples: 4

Max nTPM: 9.5
Min nTPM: 6.8
Sample A Female 9.5
Sample B Female 7.5
Sample C Male 7.9
Sample D Male 6.8
Entorhinal cortex
nTPM: 7.1
Samples: 4

Max nTPM: 8.3
Min nTPM: 6.1
Sample A Female 6.1
Sample B Female 8.3
Sample C Male 7.4
Sample D Male 6.7
Subiculum
nTPM: 8.0
Samples: 4

Max nTPM: 9.5
Min nTPM: 7.0
Sample A Female 9.5
Sample B Female 8.2
Sample C Male 7.0
Sample D Male 7.4
Ventral hippocampus
nTPM: 7.2
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.3
Sample A Female 7.7
Sample B Female 8.1
Sample C Male 6.3
Sample D Male 6.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.2
Samples: 4

Max nTPM: 50.7
Min nTPM: 41.1
Sample A Male 50.7
Sample B Male 48.5
Sample C Female 41.1
Sample D Female 48.4
Hippocampal formation
nTPM: 46.9
Samples: 4

Max nTPM: 51.9
Min nTPM: 41.1
Sample A Male 48.4
Sample B Male 51.9
Sample C Female 46.1
Sample D Female 41.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.1
68546305 Antisense, RP_050120_02_C11, Mouse strain C57BL/6J (56 days, male) 4.1

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The Human Protein Atlas

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