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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:34.0 nTPM
HPA:34.0 nTPM
GTEx:42.3 nTPM
FANTOM5:40.4 Scaled Tags Per Million
Pig:7.6 nTPM
Mouse:42.1 nTPM
Allen mouse:4.0 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 34.0
Sample id Sample description nTPM
Amygdala
nTPM: 30.7
2695 Female, age 67, right hemisphere 33.9
2514 Male, age 75, right hemisphere 31.0
2814 Male, age 76, right hemisphere 29.8
1987 Female, age 91, left hemisphere 29.5
2517 Female, age 94, left hemisphere 29.4
Basal amygdala
nTPM: 31.2
2827 Female, age 67, right hemisphere 38.5
2609 Male, age 75, right hemisphere 32.0
1955 Male, age 76, both hemispheres 30.7
2685 Female, age 94, left hemisphere 29.4
2110 Male, age 80, left hemisphere 29.1
2243 Female, age 91, right hemisphere 27.3
Central amygdala
nTPM: 31.8
2826 Female, age 94, left hemisphere 39.4
2515 Male, age 75, right hemisphere 32.0
1905 Male, age 76, both hemispheres 29.5
2239 Male, age 80, left hemisphere 29.5
2701 Female, age 91, right hemisphere 28.6
Corticomedial amygdala
nTPM: 29.7
2535 Female, age 67, right hemisphere 32.7
2428 Male, age 75, right hemisphere 31.1
2829 Male, age 80, left hemisphere 29.2
2240 Male, age 76, both hemispheres 28.8
2242 Female, age 91, right hemisphere 28.1
2429 Female, age 94, left hemisphere 28.1
Lateral amygdala
nTPM: 34.0
2830 Female, age 67, right hemisphere 42.9
2534 Female, age 94, left hemisphere 35.3
2516 Male, age 75, right hemisphere 34.5
2256 Male, age 80, left hemisphere 32.2
1883 Male, age 76, both hemispheres 30.9
2255 Female, age 91, right hemisphere 28.3
Stria terminalis, bed nucleus
nTPM: 28.6
1974 Female, age 91, both hemispheres 30.1
2201 Male, age 74, unknown 28.1
2486 Female, age 94, both hemispheres 27.8

AMYGDALA - GTEx RNA-seqi
Average nTPM 42.3
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 42.3
Samples: 152

Max nTPM: 106.7
Min nTPM: 11.2
Std nTPM: 14.6
Median nTPM: 38.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 106.7
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 81.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 80.1
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 77.8
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 75.9
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 75.6
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 72.5
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 69.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 69.5
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 69.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 69.1
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 40.4
FF:10151-102I7 76 years, female 40.4

AMYGDALA - Pig RNA-seqi
Average nTPM 7.6
Pig sample Sample description nTPM
Amygdala
nTPM: 7.6
Samples: 4

Max nTPM: 9.5
Min nTPM: 6.5
Sample A Female 7.5
Sample B Female 9.5
Sample C Male 6.8
Sample D Male 6.5

AMYGDALA - Mouse RNA-seqi
Average nTPM 42.1
Mouse sample Sample description nTPM
Amygdala
nTPM: 42.1
Samples: 4

Max nTPM: 44.3
Min nTPM: 38.4
Sample A Male 44.3
Sample B Male 44.1
Sample C Female 41.6
Sample D Female 38.4

AMYGDALA - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 4.0
68546305 Antisense, RP_050120_02_C11, Mouse strain C57BL/6J (56 days, male) 4.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.