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PTK2B
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:96.3 nTPM
HPA:96.3 nTPM
GTEx:88.3 nTPM
FANTOM5:149.6 Scaled Tags Per Million
Pig:181.0 nTPM
Mouse:403.6 nTPM
Allen mouse:22.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026091Antibody HPA026276Antibody CAB003850
Glial cells LowNot detectedNot detected
Neuronal cells HighMediumLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 96.3
Sample id Sample description nTPM
Hippocampus
nTPM: 67.1
2621 Female, age 67, right hemisphere 93.6
2148 Female, age 91, left hemisphere 84.1
1898 Male, age 80, left hemisphere 76.2
1911 Female, age 85, right hemisphere 64.5
1855 Male, age 76, left hemisphere 51.2
2529 Female, age 94, left hemisphere 32.9
Dentate gyrus
nTPM: 85.3
2531 Female, age 67, both hemispheres 133.3
1927 Female, age 91, both hemispheres 114.2
2246 Female, age 85, both hemispheres 82.5
2530 Female, age 94, left hemisphere 79.2
2010 Male, age 76, both hemispheres 58.1
2528 Male, age 74, both hemispheres 44.7
Entorhinal gyrus
nTPM: 41.0
2613 Female, age 94, left hemisphere 65.3
2764 Male, age 80, right hemisphere 55.0
1938 Female, age 85, left hemisphere 52.8
2686 Male, age 75, right hemisphere 31.7
1787 Male, age 76, left hemisphere 28.3
2117 Female, age 91, right hemisphere 13.2
Hippocampus, CA1
nTPM: 94.6
2749 Male, age 80, left hemisphere 169.7
1873 Female, age 85, both hemispheres 113.0
2045 Male, age 76, both hemispheres 93.5
2082 Female, age 91, right hemisphere 54.9
2527 Male, age 74, both hemispheres 41.9
Hippocampus, CA2
nTPM: 49.1
1963 Male, age 80, left hemisphere 87.6
1892 Male, age 76, both hemispheres 65.0
2437 Female, age 94, left hemisphere 53.0
2113 Female, age 91, right hemisphere 33.3
2249 Male, age 74, both hemispheres 30.5
1940 Female, age 85, left hemisphere 25.1
Hippocampus, CA3
nTPM: 96.3
2620 Female, age 94, left hemisphere 182.7
2137 Male, age 80, left hemisphere 127.1
2861 Female, age 67, both hemispheres 110.0
1891 Female, age 85, both hemispheres 61.3
1867 Male, age 76, both hemispheres 53.0
2436 Male, age 74, both hemispheres 43.9
Parahippocampal cortex
nTPM: 39.9
2693 Female, age 94, both hemispheres 58.0
2245 Female, age 91, both hemispheres 57.8
1933 Female, age 85, both hemispheres 50.9
1850 Male, age 80, both hemispheres 46.5
2250 Female, age 67, right hemisphere 43.6
1990 Female, age 91, right hemisphere 39.7
2622 Female, age 67, right hemisphere 33.8
2018 Male, age 76, both hemispheres 30.3
2532 Female, age 72, left hemisphere 27.6
2692 Male, age 74, both hemispheres 10.9
Perirhinal gyrus
nTPM: 64.2
2521 Female, age 94, right hemisphere 85.2
1847 Female, age 91, left hemisphere 76.5
1841 Female, age 85, right hemisphere 71.9
1794 Male, age 80, right hemisphere 57.5
2848 Male, age 76, right hemisphere 29.8
Subiculum
nTPM: 37.9
1901 Male, age 80, both hemispheres 54.0
1977 Female, age 85, both hemispheres 53.6
2729 Female, age 91, right hemisphere 47.9
2438 Female, age 94, left hemisphere 34.8
2042 Male, age 76, both hemispheres 25.8
2619 Male, age 74, both hemispheres 11.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 88.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 88.3
Samples: 197

Max nTPM: 223.7
Min nTPM: 8.0
Std nTPM: 55.3
Median nTPM: 76.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 223.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 217.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 216.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 208.4
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 207.3
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 207.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 205.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 203.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 200.6
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 195.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 193.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 149.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 149.6
FF:10169-103B7 60 years, female 214.5
FF:10153-102I9 76 years, female 84.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 181.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 181.1
Samples: 4

Max nTPM: 256.4
Min nTPM: 98.1
Sample A Female 256.4
Sample B Female 213.9
Sample C Male 98.1
Sample D Male 155.8
Entorhinal cortex
nTPM: 94.1
Samples: 4

Max nTPM: 117.7
Min nTPM: 78.0
Sample A Female 117.7
Sample B Female 90.8
Sample C Male 90.0
Sample D Male 78.0
Subiculum
nTPM: 72.9
Samples: 4

Max nTPM: 90.8
Min nTPM: 63.1
Sample A Female 90.8
Sample B Female 63.1
Sample C Male 68.7
Sample D Male 69.1
Ventral hippocampus
nTPM: 126.5
Samples: 4

Max nTPM: 205.4
Min nTPM: 68.4
Sample A Female 129.4
Sample B Female 68.4
Sample C Male 102.7
Sample D Male 205.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 403.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 164.3
Samples: 4

Max nTPM: 188.1
Min nTPM: 141.4
Sample A Male 167.0
Sample B Male 141.4
Sample C Female 188.1
Sample D Female 160.6
Hippocampal formation
nTPM: 403.6
Samples: 4

Max nTPM: 524.4
Min nTPM: 305.0
Sample A Male 305.0
Sample B Male 449.3
Sample C Female 524.4
Sample D Female 335.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.9
71920502 Antisense, RP_050915_02_B10, Mouse strain C57BL/6J (56 days, male) 22.9
74357569 Antisense, RP_050915_02_B10, Mouse strain C57BL/6J (56 days, male) 18.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.