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SLC35B1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:17.1 nTPM
HPA:17.1 nTPM
GTEx:9.8 nTPM
FANTOM5:22.0 Scaled Tags Per Million
Pig:14.1 nTPM
Mouse:23.3 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057418
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.1
Sample id Sample description nTPM
Hippocampus
nTPM: 16.4
1855 Male, age 76, left hemisphere 18.5
2621 Female, age 67, right hemisphere 18.0
1898 Male, age 80, left hemisphere 16.9
2529 Female, age 94, left hemisphere 15.6
1911 Female, age 85, right hemisphere 15.4
2148 Female, age 91, left hemisphere 13.9
Dentate gyrus
nTPM: 15.3
2010 Male, age 76, both hemispheres 17.0
1927 Female, age 91, both hemispheres 15.8
2246 Female, age 85, both hemispheres 15.4
2528 Male, age 74, both hemispheres 15.0
2530 Female, age 94, left hemisphere 15.0
2531 Female, age 67, both hemispheres 13.5
Entorhinal gyrus
nTPM: 15.9
2613 Female, age 94, left hemisphere 17.1
1938 Female, age 85, left hemisphere 16.8
1787 Male, age 76, left hemisphere 16.1
2764 Male, age 80, right hemisphere 15.6
2117 Female, age 91, right hemisphere 15.1
2686 Male, age 75, right hemisphere 14.9
Hippocampus, CA1
nTPM: 17.0
2749 Male, age 80, left hemisphere 18.5
1873 Female, age 85, both hemispheres 18.2
2527 Male, age 74, both hemispheres 17.9
2045 Male, age 76, both hemispheres 16.2
2082 Female, age 91, right hemisphere 14.2
Hippocampus, CA2
nTPM: 16.3
1892 Male, age 76, both hemispheres 19.1
1963 Male, age 80, left hemisphere 17.9
2249 Male, age 74, both hemispheres 17.0
2113 Female, age 91, right hemisphere 15.9
1940 Female, age 85, left hemisphere 14.5
2437 Female, age 94, left hemisphere 13.6
Hippocampus, CA3
nTPM: 15.9
1867 Male, age 76, both hemispheres 17.7
2436 Male, age 74, both hemispheres 16.1
1891 Female, age 85, both hemispheres 15.9
2137 Male, age 80, left hemisphere 15.7
2620 Female, age 94, left hemisphere 15.2
2861 Female, age 67, both hemispheres 14.7
Parahippocampal cortex
nTPM: 15.8
1850 Male, age 80, both hemispheres 19.2
2693 Female, age 94, both hemispheres 17.2
2692 Male, age 74, both hemispheres 16.9
1933 Female, age 85, both hemispheres 16.7
1990 Female, age 91, right hemisphere 15.4
2250 Female, age 67, right hemisphere 14.8
2018 Male, age 76, both hemispheres 14.7
2532 Female, age 72, left hemisphere 14.7
2245 Female, age 91, both hemispheres 14.1
2622 Female, age 67, right hemisphere 14.0
Perirhinal gyrus
nTPM: 17.1
1847 Female, age 91, left hemisphere 19.4
1841 Female, age 85, right hemisphere 19.0
2848 Male, age 76, right hemisphere 16.4
1794 Male, age 80, right hemisphere 15.4
2521 Female, age 94, right hemisphere 15.3
Subiculum
nTPM: 15.5
1901 Male, age 80, both hemispheres 17.1
1977 Female, age 85, both hemispheres 16.8
2042 Male, age 76, both hemispheres 15.5
2729 Female, age 91, right hemisphere 15.0
2438 Female, age 94, left hemisphere 14.2
2619 Male, age 74, both hemispheres 14.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.8
Samples: 197

Max nTPM: 24.5
Min nTPM: 4.0
Std nTPM: 2.6
Median nTPM: 9.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 24.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 17.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 17.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 17.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 16.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 15.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 15.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 15.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 15.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 14.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 14.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.0
FF:10153-102I9 76 years, female 24.2
FF:10169-103B7 60 years, female 19.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 17.8
Min nTPM: 12.2
Sample A Female 17.8
Sample B Female 13.7
Sample C Male 12.2
Sample D Male 12.9
Entorhinal cortex
nTPM: 12.1
Samples: 4

Max nTPM: 13.6
Min nTPM: 10.9
Sample A Female 13.6
Sample B Female 12.6
Sample C Male 10.9
Sample D Male 11.4
Subiculum
nTPM: 12.5
Samples: 4

Max nTPM: 14.2
Min nTPM: 11.7
Sample A Female 14.2
Sample B Female 11.7
Sample C Male 11.9
Sample D Male 12.0
Ventral hippocampus
nTPM: 13.5
Samples: 4

Max nTPM: 14.5
Min nTPM: 10.5
Sample A Female 14.5
Sample B Female 10.5
Sample C Male 14.3
Sample D Male 14.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.0
Samples: 4

Max nTPM: 23.2
Min nTPM: 16.9
Sample A Male 23.2
Sample B Male 17.3
Sample C Female 22.6
Sample D Female 16.9
Hippocampal formation
nTPM: 23.3
Samples: 4

Max nTPM: 24.7
Min nTPM: 22.3
Sample A Male 23.4
Sample B Male 24.7
Sample C Female 22.7
Sample D Female 22.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
75750380 Antisense, RP_060518_04_G07, Mouse strain C57BL/6J (56 days, male) 2.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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