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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:36.6 nTPM
HPA:36.6 nTPM
GTEx:28.7 nTPM
FANTOM5:48.7 Scaled Tags Per Million
Pig:25.4 nTPM
Mouse:64.1 nTPM
Allen mouse:8.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037577
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.6
Sample id Sample description nTPM
Hippocampus
nTPM: 31.4
2148 Female, age 91, left hemisphere 34.6
1898 Male, age 80, left hemisphere 33.7
1911 Female, age 85, right hemisphere 31.4
2621 Female, age 67, right hemisphere 30.6
2529 Female, age 94, left hemisphere 29.8
1855 Male, age 76, left hemisphere 28.7
Dentate gyrus
nTPM: 32.4
1927 Female, age 91, both hemispheres 37.2
2531 Female, age 67, both hemispheres 32.8
2528 Male, age 74, both hemispheres 32.5
2246 Female, age 85, both hemispheres 32.1
2530 Female, age 94, left hemisphere 30.8
2010 Male, age 76, both hemispheres 28.9
Entorhinal gyrus
nTPM: 34.8
2613 Female, age 94, left hemisphere 37.7
2764 Male, age 80, right hemisphere 37.7
1938 Female, age 85, left hemisphere 35.3
2686 Male, age 75, right hemisphere 35.3
1787 Male, age 76, left hemisphere 33.5
2117 Female, age 91, right hemisphere 29.2
Hippocampus, CA1
nTPM: 35.5
2749 Male, age 80, left hemisphere 46.9
2527 Male, age 74, both hemispheres 34.1
1873 Female, age 85, both hemispheres 33.6
2045 Male, age 76, both hemispheres 32.8
2082 Female, age 91, right hemisphere 30.0
Hippocampus, CA2
nTPM: 31.3
1963 Male, age 80, left hemisphere 35.8
2437 Female, age 94, left hemisphere 31.5
1940 Female, age 85, left hemisphere 30.8
1892 Male, age 76, both hemispheres 30.1
2113 Female, age 91, right hemisphere 30.0
2249 Male, age 74, both hemispheres 29.7
Hippocampus, CA3
nTPM: 36.6
2137 Male, age 80, left hemisphere 46.1
2620 Female, age 94, left hemisphere 43.4
2861 Female, age 67, both hemispheres 36.8
2436 Male, age 74, both hemispheres 31.8
1867 Male, age 76, both hemispheres 31.1
1891 Female, age 85, both hemispheres 30.3
Parahippocampal cortex
nTPM: 33.9
2622 Female, age 67, right hemisphere 39.0
1850 Male, age 80, both hemispheres 35.3
2245 Female, age 91, both hemispheres 34.9
2693 Female, age 94, both hemispheres 34.4
1933 Female, age 85, both hemispheres 34.2
1990 Female, age 91, right hemisphere 33.2
2692 Male, age 74, both hemispheres 33.0
2532 Female, age 72, left hemisphere 32.6
2250 Female, age 67, right hemisphere 32.5
2018 Male, age 76, both hemispheres 29.5
Perirhinal gyrus
nTPM: 36.5
1794 Male, age 80, right hemisphere 39.1
1841 Female, age 85, right hemisphere 37.9
1847 Female, age 91, left hemisphere 37.9
2521 Female, age 94, right hemisphere 36.1
2848 Male, age 76, right hemisphere 31.5
Subiculum
nTPM: 31.2
1901 Male, age 80, both hemispheres 33.5
1977 Female, age 85, both hemispheres 33.3
2619 Male, age 74, both hemispheres 32.7
2729 Female, age 91, right hemisphere 30.3
2438 Female, age 94, left hemisphere 29.9
2042 Male, age 76, both hemispheres 27.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.7
Samples: 197

Max nTPM: 60.2
Min nTPM: 11.3
Std nTPM: 9.4
Median nTPM: 28.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 60.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 59.9
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 54.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 52.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 52.3
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 48.1
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 48.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 47.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 47.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 46.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 45.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.7
FF:10169-103B7 60 years, female 55.4
FF:10153-102I9 76 years, female 42.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.2
Samples: 4

Max nTPM: 31.3
Min nTPM: 19.0
Sample A Female 31.3
Sample B Female 23.9
Sample C Male 22.6
Sample D Male 19.0
Entorhinal cortex
nTPM: 25.5
Samples: 4

Max nTPM: 26.9
Min nTPM: 23.9
Sample A Female 26.9
Sample B Female 24.4
Sample C Male 26.6
Sample D Male 23.9
Subiculum
nTPM: 21.8
Samples: 4

Max nTPM: 26.9
Min nTPM: 18.2
Sample A Female 26.9
Sample B Female 19.5
Sample C Male 22.4
Sample D Male 18.2
Ventral hippocampus
nTPM: 23.1
Samples: 4

Max nTPM: 31.1
Min nTPM: 14.7
Sample A Female 17.3
Sample B Female 14.7
Sample C Male 29.1
Sample D Male 31.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 64.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.1
Samples: 4

Max nTPM: 73.7
Min nTPM: 54.8
Sample A Male 61.1
Sample B Male 66.7
Sample C Female 54.8
Sample D Female 73.7
Hippocampal formation
nTPM: 54.2
Samples: 4

Max nTPM: 58.1
Min nTPM: 49.0
Sample A Male 55.2
Sample B Male 58.1
Sample C Female 54.5
Sample D Female 49.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.1
302 Antisense, RP_Baylor_102709, Mouse strain C57BL/6J (56 days, male) 8.1
303 Antisense, RP_Baylor_102709, Mouse strain C57BL/6J (56 days, male) 2.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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