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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		66.588
RNA expressioni
Consensus:32.8 nTPM
HPA:32.8 nTPM
GTEx:120.4 nTPM
FANTOM5:71.1 Scaled Tags Per Million
Pig:25.7 nTPM
Mouse:361.9 nTPM
Allen mouse:2.7 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA036636
Amygdala mean intensity 66.588
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 17.797
Basal medial amygdaloid nucleus 31.842
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 66.588
Cortical amygdala 24.548
Central amygdala 62.275
Medial amygdaloid nucleus 50.887

AMYGDALA - HPA Brain RNA-seq
Max nTPM 32.8
Sample id Sample description nTPM
Amygdala
nTPM: 17.7
1987 Female, age 91, left hemisphere 29.3
2517 Female, age 94, left hemisphere 20.0
2514 Male, age 75, right hemisphere 16.2
2695 Female, age 67, right hemisphere 11.9
2814 Male, age 76, right hemisphere 11.3
Basal amygdala
nTPM: 24.9
2110 Male, age 80, left hemisphere 40.9
1955 Male, age 76, both hemispheres 29.3
2827 Female, age 67, right hemisphere 22.2
2243 Female, age 91, right hemisphere 20.2
2685 Female, age 94, left hemisphere 19.0
2609 Male, age 75, right hemisphere 17.9
Central amygdala
nTPM: 24.9
2239 Male, age 80, left hemisphere 49.2
2701 Female, age 91, right hemisphere 27.0
2826 Female, age 94, left hemisphere 21.7
2515 Male, age 75, right hemisphere 15.8
1905 Male, age 76, both hemispheres 10.7
Corticomedial amygdala
nTPM: 32.8
2829 Male, age 80, left hemisphere 49.3
2240 Male, age 76, both hemispheres 43.4
2429 Female, age 94, left hemisphere 39.4
2535 Female, age 67, right hemisphere 30.2
2242 Female, age 91, right hemisphere 18.7
2428 Male, age 75, right hemisphere 15.7
Lateral amygdala
nTPM: 24.1
2256 Male, age 80, left hemisphere 33.3
2255 Female, age 91, right hemisphere 29.9
1883 Male, age 76, both hemispheres 21.4
2516 Male, age 75, right hemisphere 21.0
2534 Female, age 94, left hemisphere 20.3
2830 Female, age 67, right hemisphere 18.9
Stria terminalis, bed nucleus
nTPM: 31.4
2201 Male, age 74, unknown 39.7
1974 Female, age 91, both hemispheres 32.3
2486 Female, age 94, both hemispheres 22.4

AMYGDALA - GTEx RNA-seqi
Average nTPM 120.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 120.4
Samples: 152

Max nTPM: 400.8
Min nTPM: 6.8
Std nTPM: 84.4
Median nTPM: 94.5
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 400.8
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 399.6
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 388.9
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 368.2
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 333.3
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 324.1
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 294.3
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 294.3
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 287.0
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 278.4
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 272.0
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 71.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 71.1
FF:10151-102I7 76 years, female 71.1

AMYGDALA - Pig RNA-seqi
Average nTPM 25.7
Pig sample Sample description nTPM
Amygdala
nTPM: 25.7
Samples: 4

Max nTPM: 41.7
Min nTPM: 14.3
Sample A Female 41.7
Sample B Female 21.3
Sample C Male 25.6
Sample D Male 14.3

AMYGDALA - Mouse RNA-seqi
Average nTPM 361.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 361.9
Samples: 4

Max nTPM: 485.9
Min nTPM: 294.7
Sample A Male 294.7
Sample B Male 333.1
Sample C Female 485.9
Sample D Female 333.8

AMYGDALA - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 2.7
100055044 Antisense, RP_080228_07_C09, Mouse strain C57BL/6J (56 days, male) 4.8
718 Antisense, RP_Baylor_103333, Mouse strain C57BL/6J (56 days, male) 3.3
100055063 Antisense, RP_080228_07_C09, Mouse strain C57BL/6J (56 days, male) 3.3
100055050 Antisense, RP_080228_07_C09, Mouse strain C57BL/6J (56 days, male) 2.8
717 Antisense, RP_Baylor_103333, Mouse strain C57BL/6J (56 days, male) 2.7
719 Sense, RPS_Baylor_37109, Mouse strain C57BL/6J (56 days, male) 0.0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.