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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:11.4 nTPM
HPA:11.4 nTPM
GTEx:32.5 nTPM
FANTOM5:6.6 Scaled Tags Per Million
Mouse:34.6 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045114Antibody HPA050006
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.4
Sample id Sample description nTPM
Hippocampus
nTPM: 11.0
2621 Female, age 67, right hemisphere 11.4
1898 Male, age 80, left hemisphere 11.2
2529 Female, age 94, left hemisphere 11.1
1911 Female, age 85, right hemisphere 11.0
1855 Male, age 76, left hemisphere 10.9
2148 Female, age 91, left hemisphere 10.3
Dentate gyrus
nTPM: 10.5
2246 Female, age 85, both hemispheres 11.2
1927 Female, age 91, both hemispheres 10.8
2530 Female, age 94, left hemisphere 10.6
2528 Male, age 74, both hemispheres 10.2
2531 Female, age 67, both hemispheres 10.2
2010 Male, age 76, both hemispheres 9.9
Entorhinal gyrus
nTPM: 10.3
1787 Male, age 76, left hemisphere 11.2
1938 Female, age 85, left hemisphere 11.1
2117 Female, age 91, right hemisphere 10.4
2686 Male, age 75, right hemisphere 10.1
2764 Male, age 80, right hemisphere 9.7
2613 Female, age 94, left hemisphere 9.5
Hippocampus, CA1
nTPM: 11.4
2749 Male, age 80, left hemisphere 12.7
2527 Male, age 74, both hemispheres 11.6
2045 Male, age 76, both hemispheres 11.2
1873 Female, age 85, both hemispheres 11.0
2082 Female, age 91, right hemisphere 10.6
Hippocampus, CA2
nTPM: 11.1
1892 Male, age 76, both hemispheres 11.4
2249 Male, age 74, both hemispheres 11.2
1940 Female, age 85, left hemisphere 11.1
2437 Female, age 94, left hemisphere 11.1
1963 Male, age 80, left hemisphere 10.9
2113 Female, age 91, right hemisphere 10.7
Hippocampus, CA3
nTPM: 11.4
2137 Male, age 80, left hemisphere 14.6
1891 Female, age 85, both hemispheres 11.5
1867 Male, age 76, both hemispheres 11.4
2436 Male, age 74, both hemispheres 10.9
2861 Female, age 67, both hemispheres 10.5
2620 Female, age 94, left hemisphere 9.2
Parahippocampal cortex
nTPM: 10.7
2693 Female, age 94, both hemispheres 11.4
1850 Male, age 80, both hemispheres 11.3
1990 Female, age 91, right hemisphere 10.7
2532 Female, age 72, left hemisphere 10.7
2622 Female, age 67, right hemisphere 10.7
2018 Male, age 76, both hemispheres 10.5
2245 Female, age 91, both hemispheres 10.4
2250 Female, age 67, right hemisphere 10.4
1933 Female, age 85, both hemispheres 10.3
2692 Male, age 74, both hemispheres 10.2
Perirhinal gyrus
nTPM: 10.9
1847 Female, age 91, left hemisphere 11.3
2521 Female, age 94, right hemisphere 11.0
1794 Male, age 80, right hemisphere 10.9
2848 Male, age 76, right hemisphere 10.6
1841 Female, age 85, right hemisphere 10.5
Subiculum
nTPM: 10.8
1901 Male, age 80, both hemispheres 11.8
1977 Female, age 85, both hemispheres 11.1
2042 Male, age 76, both hemispheres 10.7
2619 Male, age 74, both hemispheres 10.5
2729 Female, age 91, right hemisphere 10.3
2438 Female, age 94, left hemisphere 10.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.5
Samples: 197

Max nTPM: 59.3
Min nTPM: 15.5
Std nTPM: 7.3
Median nTPM: 31.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 59.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 51.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 50.2
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 49.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 49.1
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 48.8
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 48.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 47.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 46.3
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 45.8
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 45.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 6.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 6.6
FF:10169-103B7 60 years, female 8.3
FF:10153-102I9 76 years, female 4.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.4
Samples: 4

Max nTPM: 36.9
Min nTPM: 27.7
Sample A Male 33.5
Sample B Male 36.9
Sample C Female 31.6
Sample D Female 27.7
Hippocampal formation
nTPM: 34.6
Samples: 4

Max nTPM: 39.9
Min nTPM: 31.5
Sample A Male 39.9
Sample B Male 34.7
Sample C Female 31.5
Sample D Female 32.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
70528270 Antisense, RP_050623_02_C02, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.