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PHF24
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:25.5 nTPM
HPA:25.5 nTPM
GTEx:21.3 nTPM
FANTOM5:15.1 Scaled Tags Per Million
Pig:85.0 nTPM
Mouse:118.3 nTPM
Allen mouse:11.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020974
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.5
Sample id Sample description nTPM
Hippocampus
nTPM: 6.2
2621 Female, age 67, right hemisphere 10.2
2148 Female, age 91, left hemisphere 9.8
1898 Male, age 80, left hemisphere 9.7
1855 Male, age 76, left hemisphere 3.3
1911 Female, age 85, right hemisphere 2.3
2529 Female, age 94, left hemisphere 1.9
Dentate gyrus
nTPM: 6.6
1927 Female, age 91, both hemispheres 15.5
2530 Female, age 94, left hemisphere 7.5
2531 Female, age 67, both hemispheres 5.6
2246 Female, age 85, both hemispheres 4.1
2010 Male, age 76, both hemispheres 3.9
2528 Male, age 74, both hemispheres 3.2
Entorhinal gyrus
nTPM: 19.0
2613 Female, age 94, left hemisphere 36.2
2764 Male, age 80, right hemisphere 24.0
1938 Female, age 85, left hemisphere 19.1
2686 Male, age 75, right hemisphere 16.7
1787 Male, age 76, left hemisphere 16.4
2117 Female, age 91, right hemisphere 1.3
Hippocampus, CA1
nTPM: 9.4
2749 Male, age 80, left hemisphere 29.7
2527 Male, age 74, both hemispheres 9.2
1873 Female, age 85, both hemispheres 5.9
2082 Female, age 91, right hemisphere 2.0
2045 Male, age 76, both hemispheres 0.0
Hippocampus, CA2
nTPM: 9.7
1963 Male, age 80, left hemisphere 17.9
1892 Male, age 76, both hemispheres 15.9
2437 Female, age 94, left hemisphere 10.5
1940 Female, age 85, left hemisphere 7.6
2113 Female, age 91, right hemisphere 4.0
2249 Male, age 74, both hemispheres 2.5
Hippocampus, CA3
nTPM: 9.2
2137 Male, age 80, left hemisphere 25.7
2861 Female, age 67, both hemispheres 12.5
1867 Male, age 76, both hemispheres 6.6
2620 Female, age 94, left hemisphere 6.6
2436 Male, age 74, both hemispheres 2.6
1891 Female, age 85, both hemispheres 1.3
Parahippocampal cortex
nTPM: 17.6
1850 Male, age 80, both hemispheres 25.3
2622 Female, age 67, right hemisphere 25.0
2693 Female, age 94, both hemispheres 21.0
2245 Female, age 91, both hemispheres 19.9
1933 Female, age 85, both hemispheres 19.1
2532 Female, age 72, left hemisphere 19.0
1990 Female, age 91, right hemisphere 17.1
2250 Female, age 67, right hemisphere 14.4
2692 Male, age 74, both hemispheres 11.8
2018 Male, age 76, both hemispheres 2.8
Perirhinal gyrus
nTPM: 25.5
1847 Female, age 91, left hemisphere 31.5
2521 Female, age 94, right hemisphere 31.5
1794 Male, age 80, right hemisphere 25.0
1841 Female, age 85, right hemisphere 23.6
2848 Male, age 76, right hemisphere 16.0
Subiculum
nTPM: 6.2
1977 Female, age 85, both hemispheres 10.6
2438 Female, age 94, left hemisphere 10.1
1901 Male, age 80, both hemispheres 8.2
2619 Male, age 74, both hemispheres 8.1
2042 Male, age 76, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.3
Samples: 197

Max nTPM: 63.4
Min nTPM: 1.3
Std nTPM: 14.0
Median nTPM: 19.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 63.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 62.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 62.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 61.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 59.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 54.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 50.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 50.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 49.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 49.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 49.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.1
FF:10153-102I9 76 years, female 20.8
FF:10169-103B7 60 years, female 9.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 85.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 57.4
Samples: 4

Max nTPM: 65.8
Min nTPM: 46.5
Sample A Female 65.8
Sample B Female 61.8
Sample C Male 55.5
Sample D Male 46.5
Entorhinal cortex
nTPM: 85.1
Samples: 4

Max nTPM: 93.0
Min nTPM: 77.8
Sample A Female 93.0
Sample B Female 77.8
Sample C Male 87.4
Sample D Male 82.0
Subiculum
nTPM: 63.0
Samples: 4

Max nTPM: 89.5
Min nTPM: 52.6
Sample A Female 89.5
Sample B Female 56.9
Sample C Male 53.1
Sample D Male 52.6
Ventral hippocampus
nTPM: 47.3
Samples: 4

Max nTPM: 56.7
Min nTPM: 35.0
Sample A Female 44.1
Sample B Female 35.0
Sample C Male 53.3
Sample D Male 56.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 118.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 118.3
Samples: 4

Max nTPM: 136.3
Min nTPM: 95.9
Sample A Male 118.0
Sample B Male 136.3
Sample C Female 95.9
Sample D Female 123.1
Hippocampal formation
nTPM: 60.7
Samples: 4

Max nTPM: 69.7
Min nTPM: 54.1
Sample A Male 69.7
Sample B Male 64.1
Sample C Female 54.7
Sample D Female 54.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.3
71234529 Antisense, RP_050505_02_B11, Mouse strain C57BL/6J (56 days, male) 14.1
75042236 Antisense, RP_051219_02_A04, Mouse strain C57BL/6J (56 days, male) 8.5
73949620 Antisense, RP_051219_02_A04, Mouse strain C57BL/6J (56 days, male) 5.3

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.