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RNF11
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:88.2 nTPM
HPA:88.2 nTPM
GTEx:103.1 nTPM
FANTOM5:290.1 Scaled Tags Per Million
Pig:117.5 nTPM
Mouse:272.2 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045781
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 88.2
Sample id Sample description nTPM
Hippocampus
nTPM: 74.8
1898 Male, age 80, left hemisphere 97.1
1855 Male, age 76, left hemisphere 80.1
1911 Female, age 85, right hemisphere 69.1
2529 Female, age 94, left hemisphere 68.1
2621 Female, age 67, right hemisphere 67.3
2148 Female, age 91, left hemisphere 67.1
Dentate gyrus
nTPM: 74.7
1927 Female, age 91, both hemispheres 84.5
2530 Female, age 94, left hemisphere 81.3
2010 Male, age 76, both hemispheres 79.4
2246 Female, age 85, both hemispheres 71.4
2528 Male, age 74, both hemispheres 68.7
2531 Female, age 67, both hemispheres 62.8
Entorhinal gyrus
nTPM: 77.0
1938 Female, age 85, left hemisphere 90.1
2613 Female, age 94, left hemisphere 81.0
1787 Male, age 76, left hemisphere 80.6
2764 Male, age 80, right hemisphere 75.0
2686 Male, age 75, right hemisphere 69.3
2117 Female, age 91, right hemisphere 66.4
Hippocampus, CA1
nTPM: 79.6
2749 Male, age 80, left hemisphere 110.6
1873 Female, age 85, both hemispheres 80.4
2527 Male, age 74, both hemispheres 72.8
2045 Male, age 76, both hemispheres 70.1
2082 Female, age 91, right hemisphere 63.9
Hippocampus, CA2
nTPM: 77.1
1963 Male, age 80, left hemisphere 91.7
1892 Male, age 76, both hemispheres 90.5
1940 Female, age 85, left hemisphere 72.9
2437 Female, age 94, left hemisphere 72.1
2113 Female, age 91, right hemisphere 67.9
2249 Male, age 74, both hemispheres 67.7
Hippocampus, CA3
nTPM: 76.5
2137 Male, age 80, left hemisphere 102.7
1867 Male, age 76, both hemispheres 80.9
2861 Female, age 67, both hemispheres 73.3
1891 Female, age 85, both hemispheres 70.6
2436 Male, age 74, both hemispheres 67.0
2620 Female, age 94, left hemisphere 64.6
Parahippocampal cortex
nTPM: 78.6
1850 Male, age 80, both hemispheres 93.0
1933 Female, age 85, both hemispheres 83.3
1990 Female, age 91, right hemisphere 82.9
2693 Female, age 94, both hemispheres 81.3
2250 Female, age 67, right hemisphere 78.4
2245 Female, age 91, both hemispheres 77.4
2532 Female, age 72, left hemisphere 76.3
2692 Male, age 74, both hemispheres 75.4
2018 Male, age 76, both hemispheres 71.1
2622 Female, age 67, right hemisphere 67.3
Perirhinal gyrus
nTPM: 88.2
1847 Female, age 91, left hemisphere 95.9
1841 Female, age 85, right hemisphere 90.1
1794 Male, age 80, right hemisphere 88.7
2521 Female, age 94, right hemisphere 85.9
2848 Male, age 76, right hemisphere 80.3
Subiculum
nTPM: 70.6
1901 Male, age 80, both hemispheres 79.1
1977 Female, age 85, both hemispheres 75.8
2438 Female, age 94, left hemisphere 74.5
2729 Female, age 91, right hemisphere 66.0
2042 Male, age 76, both hemispheres 65.3
2619 Male, age 74, both hemispheres 63.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 103.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 103.1
Samples: 197

Max nTPM: 230.1
Min nTPM: 25.9
Std nTPM: 35.8
Median nTPM: 99.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 230.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 220.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 189.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 187.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 185.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 184.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 181.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 180.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 180.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 176.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 174.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 290.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 290.1
FF:10169-103B7 60 years, female 330.6
FF:10153-102I9 76 years, female 249.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 117.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 106.7
Samples: 4

Max nTPM: 130.2
Min nTPM: 80.7
Sample A Female 130.2
Sample B Female 106.8
Sample C Male 109.2
Sample D Male 80.7
Entorhinal cortex
nTPM: 117.4
Samples: 4

Max nTPM: 134.5
Min nTPM: 100.6
Sample A Female 103.7
Sample B Female 134.5
Sample C Male 130.6
Sample D Male 100.6
Subiculum
nTPM: 117.5
Samples: 4

Max nTPM: 154.6
Min nTPM: 101.6
Sample A Female 154.6
Sample B Female 108.4
Sample C Male 101.6
Sample D Male 105.3
Ventral hippocampus
nTPM: 97.5
Samples: 4

Max nTPM: 102.8
Min nTPM: 82.4
Sample A Female 102.8
Sample B Female 82.4
Sample C Male 102.4
Sample D Male 102.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 272.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 272.2
Samples: 4

Max nTPM: 285.0
Min nTPM: 263.3
Sample A Male 263.3
Sample B Male 285.0
Sample C Female 267.9
Sample D Female 272.7
Hippocampal formation
nTPM: 247.0
Samples: 4

Max nTPM: 283.5
Min nTPM: 221.9
Sample A Male 283.5
Sample B Male 238.2
Sample C Female 244.2
Sample D Female 221.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
1276 Antisense, RP_Baylor_103167, Mouse strain C57BL/6J (56 days, male) 6.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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