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GIPC1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:74.5 nTPM
HPA:74.5 nTPM
GTEx:89.3 nTPM
FANTOM5:24.6 Scaled Tags Per Million
Pig:26.3 nTPM
Mouse:53.7 nTPM
Allen mouse:5.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043958
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 74.5
Sample id Sample description nTPM
Hippocampus
nTPM: 71.3
2529 Female, age 94, left hemisphere 74.1
1898 Male, age 80, left hemisphere 73.6
1911 Female, age 85, right hemisphere 72.6
2621 Female, age 67, right hemisphere 71.0
2148 Female, age 91, left hemisphere 69.2
1855 Male, age 76, left hemisphere 67.6
Dentate gyrus
nTPM: 69.6
2530 Female, age 94, left hemisphere 75.8
2246 Female, age 85, both hemispheres 68.9
2010 Male, age 76, both hemispheres 68.7
2531 Female, age 67, both hemispheres 68.5
1927 Female, age 91, both hemispheres 68.2
2528 Male, age 74, both hemispheres 67.3
Entorhinal gyrus
nTPM: 74.5
2764 Male, age 80, right hemisphere 76.9
2686 Male, age 75, right hemisphere 76.7
2117 Female, age 91, right hemisphere 76.5
2613 Female, age 94, left hemisphere 73.0
1787 Male, age 76, left hemisphere 72.8
1938 Female, age 85, left hemisphere 70.9
Hippocampus, CA1
nTPM: 70.1
2749 Male, age 80, left hemisphere 76.5
2527 Male, age 74, both hemispheres 71.5
1873 Female, age 85, both hemispheres 69.3
2082 Female, age 91, right hemisphere 67.3
2045 Male, age 76, both hemispheres 65.8
Hippocampus, CA2
nTPM: 71.8
1963 Male, age 80, left hemisphere 76.4
2437 Female, age 94, left hemisphere 76.2
1940 Female, age 85, left hemisphere 72.6
1892 Male, age 76, both hemispheres 71.8
2249 Male, age 74, both hemispheres 67.3
2113 Female, age 91, right hemisphere 66.7
Hippocampus, CA3
nTPM: 70.1
1867 Male, age 76, both hemispheres 73.6
2861 Female, age 67, both hemispheres 71.6
1891 Female, age 85, both hemispheres 71.5
2137 Male, age 80, left hemisphere 71.1
2620 Female, age 94, left hemisphere 67.8
2436 Male, age 74, both hemispheres 64.8
Parahippocampal cortex
nTPM: 70.0
2692 Male, age 74, both hemispheres 75.1
1850 Male, age 80, both hemispheres 74.0
2622 Female, age 67, right hemisphere 71.3
1933 Female, age 85, both hemispheres 70.5
2532 Female, age 72, left hemisphere 70.4
2245 Female, age 91, both hemispheres 69.1
2018 Male, age 76, both hemispheres 68.5
1990 Female, age 91, right hemisphere 68.4
2693 Female, age 94, both hemispheres 66.6
2250 Female, age 67, right hemisphere 66.1
Perirhinal gyrus
nTPM: 71.8
1794 Male, age 80, right hemisphere 79.1
2521 Female, age 94, right hemisphere 73.3
1847 Female, age 91, left hemisphere 70.7
1841 Female, age 85, right hemisphere 68.5
2848 Male, age 76, right hemisphere 67.1
Subiculum
nTPM: 73.5
1901 Male, age 80, both hemispheres 78.2
2619 Male, age 74, both hemispheres 76.1
2042 Male, age 76, both hemispheres 74.8
1977 Female, age 85, both hemispheres 71.0
2438 Female, age 94, left hemisphere 70.9
2729 Female, age 91, right hemisphere 69.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 89.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 89.3
Samples: 197

Max nTPM: 173.1
Min nTPM: 27.7
Std nTPM: 18.6
Median nTPM: 87.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 173.1
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 142.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 132.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 130.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 128.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 128.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 123.6
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 122.4
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 122.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 121.2
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 120.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.6
FF:10153-102I9 76 years, female 27.3
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.6
Samples: 4

Max nTPM: 31.4
Min nTPM: 16.2
Sample A Female 31.4
Sample B Female 22.4
Sample C Male 28.5
Sample D Male 16.2
Entorhinal cortex
nTPM: 26.3
Samples: 4

Max nTPM: 31.1
Min nTPM: 23.8
Sample A Female 25.6
Sample B Female 31.1
Sample C Male 24.6
Sample D Male 23.8
Subiculum
nTPM: 20.3
Samples: 4

Max nTPM: 25.8
Min nTPM: 17.2
Sample A Female 25.8
Sample B Female 17.2
Sample C Male 18.5
Sample D Male 19.6
Ventral hippocampus
nTPM: 21.6
Samples: 4

Max nTPM: 25.6
Min nTPM: 14.6
Sample A Female 21.5
Sample B Female 14.6
Sample C Male 25.6
Sample D Male 24.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 53.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.6
Samples: 4

Max nTPM: 58.3
Min nTPM: 50.8
Sample A Male 51.9
Sample B Male 58.3
Sample C Female 50.8
Sample D Female 53.5
Hippocampal formation
nTPM: 44.7
Samples: 4

Max nTPM: 51.9
Min nTPM: 37.7
Sample A Male 49.0
Sample B Male 40.1
Sample C Female 37.7
Sample D Female 51.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.7
67755429 Antisense, RP_040922_01_C06, Mouse strain C57BL/6J (56 days, male) 5.7
68196959 Antisense, RP_040922_01_C06, Mouse strain C57BL/6J (56 days, male) 1.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.