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ZC3H13
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:17.4 nTPM
HPA:17.4 nTPM
GTEx:16.9 nTPM
FANTOM5:100.9 Scaled Tags Per Million
Pig:24.8 nTPM
Mouse:15.7 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039340Antibody HPA040140Antibody HPA047806
Glial cells Not detectedMediumNot detected
Neuronal cells Not detectedMediumMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.4
Sample id Sample description nTPM
Hippocampus
nTPM: 16.9
2529 Female, age 94, left hemisphere 21.3
2621 Female, age 67, right hemisphere 18.0
1855 Male, age 76, left hemisphere 16.1
1911 Female, age 85, right hemisphere 16.0
1898 Male, age 80, left hemisphere 15.6
2148 Female, age 91, left hemisphere 14.6
Dentate gyrus
nTPM: 15.1
2530 Female, age 94, left hemisphere 22.5
2531 Female, age 67, both hemispheres 18.3
2246 Female, age 85, both hemispheres 14.7
2010 Male, age 76, both hemispheres 14.1
1927 Female, age 91, both hemispheres 10.7
2528 Male, age 74, both hemispheres 10.0
Entorhinal gyrus
nTPM: 17.4
2686 Male, age 75, right hemisphere 25.5
2117 Female, age 91, right hemisphere 19.5
2613 Female, age 94, left hemisphere 16.8
1938 Female, age 85, left hemisphere 15.1
1787 Male, age 76, left hemisphere 13.9
2764 Male, age 80, right hemisphere 13.5
Hippocampus, CA1
nTPM: 13.9
2527 Male, age 74, both hemispheres 17.2
1873 Female, age 85, both hemispheres 15.0
2749 Male, age 80, left hemisphere 14.7
2045 Male, age 76, both hemispheres 12.0
2082 Female, age 91, right hemisphere 10.9
Hippocampus, CA2
nTPM: 14.0
2437 Female, age 94, left hemisphere 16.7
1892 Male, age 76, both hemispheres 14.4
1963 Male, age 80, left hemisphere 14.3
2113 Female, age 91, right hemisphere 13.6
1940 Female, age 85, left hemisphere 12.6
2249 Male, age 74, both hemispheres 12.2
Hippocampus, CA3
nTPM: 13.3
1891 Female, age 85, both hemispheres 16.7
2861 Female, age 67, both hemispheres 15.2
2137 Male, age 80, left hemisphere 14.5
1867 Male, age 76, both hemispheres 13.2
2620 Female, age 94, left hemisphere 12.5
2436 Male, age 74, both hemispheres 7.8
Parahippocampal cortex
nTPM: 16.0
2622 Female, age 67, right hemisphere 20.0
2532 Female, age 72, left hemisphere 19.8
2692 Male, age 74, both hemispheres 19.8
2245 Female, age 91, both hemispheres 19.4
1850 Male, age 80, both hemispheres 16.3
1990 Female, age 91, right hemisphere 13.5
2693 Female, age 94, both hemispheres 13.5
2018 Male, age 76, both hemispheres 13.2
1933 Female, age 85, both hemispheres 12.4
2250 Female, age 67, right hemisphere 11.7
Perirhinal gyrus
nTPM: 13.1
2848 Male, age 76, right hemisphere 15.9
1841 Female, age 85, right hemisphere 13.2
1794 Male, age 80, right hemisphere 12.6
2521 Female, age 94, right hemisphere 12.1
1847 Female, age 91, left hemisphere 11.6
Subiculum
nTPM: 17.2
2438 Female, age 94, left hemisphere 25.0
1901 Male, age 80, both hemispheres 18.9
1977 Female, age 85, both hemispheres 16.4
2042 Male, age 76, both hemispheres 15.5
2619 Male, age 74, both hemispheres 15.4
2729 Female, age 91, right hemisphere 11.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.9
Samples: 197

Max nTPM: 32.9
Min nTPM: 10.1
Std nTPM: 4.3
Median nTPM: 15.9
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 32.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 32.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 30.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 29.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 29.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 28.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 27.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 27.0
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 26.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 26.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 25.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.9
FF:10169-103B7 60 years, female 104.6
FF:10153-102I9 76 years, female 97.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.7
Samples: 4

Max nTPM: 26.7
Min nTPM: 23.2
Sample A Female 25.5
Sample B Female 23.2
Sample C Male 26.7
Sample D Male 23.5
Entorhinal cortex
nTPM: 24.5
Samples: 4

Max nTPM: 25.8
Min nTPM: 23.1
Sample A Female 25.3
Sample B Female 23.1
Sample C Male 23.7
Sample D Male 25.8
Subiculum
nTPM: 24.3
Samples: 4

Max nTPM: 27.6
Min nTPM: 22.5
Sample A Female 27.6
Sample B Female 23.2
Sample C Male 23.7
Sample D Male 22.5
Ventral hippocampus
nTPM: 23.7
Samples: 4

Max nTPM: 27.0
Min nTPM: 21.6
Sample A Female 22.7
Sample B Female 21.6
Sample C Male 23.6
Sample D Male 27.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.7
Samples: 4

Max nTPM: 22.1
Min nTPM: 13.1
Sample A Male 14.4
Sample B Male 13.1
Sample C Female 13.2
Sample D Female 22.1
Hippocampal formation
nTPM: 14.5
Samples: 4

Max nTPM: 18.1
Min nTPM: 10.6
Sample A Male 10.6
Sample B Male 17.7
Sample C Female 18.1
Sample D Female 11.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.