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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:14.7 nTPM
HPA:14.7 nTPM
GTEx:12.4 nTPM
FANTOM5:12.3 Scaled Tags Per Million
Pig:3.4 nTPM
Mouse:12.3 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038305
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.7
Sample id Sample description nTPM
Hippocampus
nTPM: 14.7
1911 Female, age 85, right hemisphere 16.6
2529 Female, age 94, left hemisphere 16.0
2621 Female, age 67, right hemisphere 15.2
1855 Male, age 76, left hemisphere 14.1
2148 Female, age 91, left hemisphere 13.3
1898 Male, age 80, left hemisphere 13.1
Dentate gyrus
nTPM: 14.2
2530 Female, age 94, left hemisphere 17.4
2010 Male, age 76, both hemispheres 15.0
2531 Female, age 67, both hemispheres 13.7
2246 Female, age 85, both hemispheres 13.5
1927 Female, age 91, both hemispheres 12.9
2528 Male, age 74, both hemispheres 12.8
Entorhinal gyrus
nTPM: 12.6
2686 Male, age 75, right hemisphere 13.9
1787 Male, age 76, left hemisphere 13.6
2117 Female, age 91, right hemisphere 12.4
2613 Female, age 94, left hemisphere 12.0
1938 Female, age 85, left hemisphere 11.7
2764 Male, age 80, right hemisphere 11.7
Hippocampus, CA1
nTPM: 13.5
2045 Male, age 76, both hemispheres 14.5
1873 Female, age 85, both hemispheres 13.7
2527 Male, age 74, both hemispheres 13.7
2749 Male, age 80, left hemisphere 13.0
2082 Female, age 91, right hemisphere 12.6
Hippocampus, CA2
nTPM: 14.0
2437 Female, age 94, left hemisphere 15.6
1963 Male, age 80, left hemisphere 15.2
1940 Female, age 85, left hemisphere 13.5
2249 Male, age 74, both hemispheres 13.5
1892 Male, age 76, both hemispheres 13.1
2113 Female, age 91, right hemisphere 13.1
Hippocampus, CA3
nTPM: 14.7
2861 Female, age 67, both hemispheres 17.3
1867 Male, age 76, both hemispheres 15.9
2436 Male, age 74, both hemispheres 15.0
1891 Female, age 85, both hemispheres 14.0
2137 Male, age 80, left hemisphere 13.5
2620 Female, age 94, left hemisphere 12.7
Parahippocampal cortex
nTPM: 13.2
2018 Male, age 76, both hemispheres 19.2
2622 Female, age 67, right hemisphere 14.5
2692 Male, age 74, both hemispheres 13.0
2532 Female, age 72, left hemisphere 12.9
1990 Female, age 91, right hemisphere 12.7
2245 Female, age 91, both hemispheres 12.6
2693 Female, age 94, both hemispheres 12.6
1850 Male, age 80, both hemispheres 11.8
1933 Female, age 85, both hemispheres 11.6
2250 Female, age 67, right hemisphere 11.4
Perirhinal gyrus
nTPM: 12.4
1841 Female, age 85, right hemisphere 14.4
1794 Male, age 80, right hemisphere 12.7
2521 Female, age 94, right hemisphere 12.3
2848 Male, age 76, right hemisphere 11.7
1847 Female, age 91, left hemisphere 11.1
Subiculum
nTPM: 13.7
2438 Female, age 94, left hemisphere 15.3
2042 Male, age 76, both hemispheres 15.2
2619 Male, age 74, both hemispheres 13.6
2729 Female, age 91, right hemisphere 12.9
1901 Male, age 80, both hemispheres 12.6
1977 Female, age 85, both hemispheres 12.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.4
Samples: 197

Max nTPM: 31.3
Min nTPM: 0.9
Std nTPM: 6.0
Median nTPM: 11.7
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 31.3
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 29.7
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 29.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 28.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 26.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 25.5
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 25.4
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 23.5
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 23.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 22.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 22.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.3
FF:10153-102I9 76 years, female 15.2
FF:10169-103B7 60 years, female 9.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.3
Samples: 4

Max nTPM: 2.6
Min nTPM: 2.1
Sample A Female 2.3
Sample B Female 2.3
Sample C Male 2.6
Sample D Male 2.1
Entorhinal cortex
nTPM: 3.4
Samples: 4

Max nTPM: 4.2
Min nTPM: 2.6
Sample A Female 3.8
Sample B Female 3.0
Sample C Male 4.2
Sample D Male 2.6
Subiculum
nTPM: 2.8
Samples: 4

Max nTPM: 3.2
Min nTPM: 2.2
Sample A Female 3.2
Sample B Female 2.2
Sample C Male 2.8
Sample D Male 3.1
Ventral hippocampus
nTPM: 3.1
Samples: 4

Max nTPM: 4.7
Min nTPM: 2.4
Sample A Female 2.5
Sample B Female 2.4
Sample C Male 4.7
Sample D Male 2.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.3
Samples: 4

Max nTPM: 14.0
Min nTPM: 10.2
Sample A Male 12.5
Sample B Male 10.2
Sample C Female 12.5
Sample D Female 14.0
Hippocampal formation
nTPM: 9.2
Samples: 4

Max nTPM: 9.6
Min nTPM: 8.7
Sample A Male 8.7
Sample B Male 9.1
Sample C Female 9.5
Sample D Female 9.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
68745161 Antisense, RP_050210_01_D02, Mouse strain C57BL/6J (56 days, male) 2.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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