ABOUTMENU
HELP
NEWS
PFDN5
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:880.3 nTPM
HPA:880.3 nTPM
GTEx:742.4 nTPM
FANTOM5:212.1 Scaled Tags Per Million
Pig:0.2 nTPM
Mouse:296.0 nTPM
Allen mouse:5.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008587
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 880.3
Sample id Sample description nTPM
Hippocampus
nTPM: 880.2
2529 Female, age 94, left hemisphere 892.2
1898 Male, age 80, left hemisphere 888.5
2621 Female, age 67, right hemisphere 880.6
1855 Male, age 76, left hemisphere 873.9
2148 Female, age 91, left hemisphere 873.6
1911 Female, age 85, right hemisphere 872.3
Dentate gyrus
nTPM: 880.3
2530 Female, age 94, left hemisphere 911.6
2246 Female, age 85, both hemispheres 878.6
2010 Male, age 76, both hemispheres 876.3
2531 Female, age 67, both hemispheres 875.1
1927 Female, age 91, both hemispheres 872.1
2528 Male, age 74, both hemispheres 868.0
Entorhinal gyrus
nTPM: 874.4
2686 Male, age 75, right hemisphere 882.6
1787 Male, age 76, left hemisphere 880.1
2117 Female, age 91, right hemisphere 878.7
2764 Male, age 80, right hemisphere 875.2
1938 Female, age 85, left hemisphere 874.4
2613 Female, age 94, left hemisphere 855.7
Hippocampus, CA1
nTPM: 873.6
2749 Male, age 80, left hemisphere 880.4
2527 Male, age 74, both hemispheres 873.6
2045 Male, age 76, both hemispheres 873.5
2082 Female, age 91, right hemisphere 872.6
1873 Female, age 85, both hemispheres 867.8
Hippocampus, CA2
nTPM: 876.8
1963 Male, age 80, left hemisphere 887.1
1892 Male, age 76, both hemispheres 881.7
2437 Female, age 94, left hemisphere 880.8
2113 Female, age 91, right hemisphere 873.6
2249 Male, age 74, both hemispheres 872.5
1940 Female, age 85, left hemisphere 865.0
Hippocampus, CA3
nTPM: 868.8
1867 Male, age 76, both hemispheres 882.1
2137 Male, age 80, left hemisphere 877.2
1891 Female, age 85, both hemispheres 873.7
2861 Female, age 67, both hemispheres 868.1
2436 Male, age 74, both hemispheres 867.9
2620 Female, age 94, left hemisphere 843.9
Parahippocampal cortex
nTPM: 873.3
2018 Male, age 76, both hemispheres 890.4
2532 Female, age 72, left hemisphere 882.3
1850 Male, age 80, both hemispheres 877.4
2245 Female, age 91, both hemispheres 876.9
1990 Female, age 91, right hemisphere 876.3
1933 Female, age 85, both hemispheres 874.0
2250 Female, age 67, right hemisphere 871.7
2692 Male, age 74, both hemispheres 867.9
2622 Female, age 67, right hemisphere 858.5
2693 Female, age 94, both hemispheres 857.4
Perirhinal gyrus
nTPM: 879.7
1847 Female, age 91, left hemisphere 886.9
1841 Female, age 85, right hemisphere 884.2
2848 Male, age 76, right hemisphere 878.4
1794 Male, age 80, right hemisphere 877.6
2521 Female, age 94, right hemisphere 871.4
Subiculum
nTPM: 875.4
1901 Male, age 80, both hemispheres 884.8
2042 Male, age 76, both hemispheres 880.6
1977 Female, age 85, both hemispheres 880.2
2438 Female, age 94, left hemisphere 874.9
2729 Female, age 91, right hemisphere 867.9
2619 Male, age 74, both hemispheres 864.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 742.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 742.4
Samples: 197

Max nTPM: 2007.9
Min nTPM: 349.7
Std nTPM: 245.1
Median nTPM: 676.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2007.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1614.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1504.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1484.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1447.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1443.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1303.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1302.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1262.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1248.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1239.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 212.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 212.1
FF:10169-103B7 60 years, female 220.7
FF:10153-102I9 76 years, female 203.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 0.2
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.1
Sample A Female 0.2
Sample B Female 0.2
Sample C Male 0.1
Sample D Male 0.2
Entorhinal cortex
nTPM: 0.2
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.1
Sample A Female 0.1
Sample B Female 0.1
Sample C Male 0.1
Sample D Male 0.4
Subiculum
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.1
Sample C Male 0.1
Sample D Male 0.1
Ventral hippocampus
nTPM: 0.2
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.2
Sample A Female 0.2
Sample B Female 0.3
Sample C Male 0.2
Sample D Male 0.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 296.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 293.2
Samples: 4

Max nTPM: 323.3
Min nTPM: 274.9
Sample A Male 279.8
Sample B Male 294.9
Sample C Female 323.3
Sample D Female 274.9
Hippocampal formation
nTPM: 296.0
Samples: 4

Max nTPM: 356.0
Min nTPM: 258.2
Sample A Male 356.0
Sample B Male 286.3
Sample C Female 283.3
Sample D Female 258.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.0
68498271 Antisense, RP_050113_01_F04, Mouse strain C57BL/6J (56 days, male) 5.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.