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NR4A1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:21.5 nTPM
HPA:21.5 nTPM
GTEx:46.7 nTPM
FANTOM5:22.3 Scaled Tags Per Million
Pig:34.0 nTPM
Mouse:58.9 nTPM
Allen mouse:6.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA070142
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.5
Sample id Sample description nTPM
Hippocampus
nTPM: 14.2
1855 Male, age 76, left hemisphere 21.0
2529 Female, age 94, left hemisphere 16.1
1911 Female, age 85, right hemisphere 16.0
2621 Female, age 67, right hemisphere 12.4
1898 Male, age 80, left hemisphere 10.9
2148 Female, age 91, left hemisphere 8.9
Dentate gyrus
nTPM: 13.7
2530 Female, age 94, left hemisphere 21.7
2010 Male, age 76, both hemispheres 16.7
2246 Female, age 85, both hemispheres 13.6
2531 Female, age 67, both hemispheres 12.6
1927 Female, age 91, both hemispheres 10.3
2528 Male, age 74, both hemispheres 7.1
Entorhinal gyrus
nTPM: 18.4
2686 Male, age 75, right hemisphere 27.7
1787 Male, age 76, left hemisphere 22.9
2764 Male, age 80, right hemisphere 16.5
1938 Female, age 85, left hemisphere 14.5
2613 Female, age 94, left hemisphere 14.4
2117 Female, age 91, right hemisphere 14.3
Hippocampus, CA1
nTPM: 14.7
2045 Male, age 76, both hemispheres 25.6
2749 Male, age 80, left hemisphere 20.3
1873 Female, age 85, both hemispheres 10.0
2527 Male, age 74, both hemispheres 9.4
2082 Female, age 91, right hemisphere 8.4
Hippocampus, CA2
nTPM: 14.0
1892 Male, age 76, both hemispheres 19.9
2437 Female, age 94, left hemisphere 15.3
1940 Female, age 85, left hemisphere 14.8
1963 Male, age 80, left hemisphere 12.2
2249 Male, age 74, both hemispheres 11.6
2113 Female, age 91, right hemisphere 10.3
Hippocampus, CA3
nTPM: 21.5
2436 Male, age 74, both hemispheres 35.8
2137 Male, age 80, left hemisphere 27.1
1867 Male, age 76, both hemispheres 24.5
2861 Female, age 67, both hemispheres 17.7
1891 Female, age 85, both hemispheres 13.4
2620 Female, age 94, left hemisphere 10.7
Parahippocampal cortex
nTPM: 15.9
2622 Female, age 67, right hemisphere 22.0
2245 Female, age 91, both hemispheres 21.6
1990 Female, age 91, right hemisphere 17.8
2532 Female, age 72, left hemisphere 17.4
1850 Male, age 80, both hemispheres 15.0
2250 Female, age 67, right hemisphere 15.0
1933 Female, age 85, both hemispheres 14.9
2018 Male, age 76, both hemispheres 14.0
2692 Male, age 74, both hemispheres 11.8
2693 Female, age 94, both hemispheres 9.5
Perirhinal gyrus
nTPM: 16.9
2848 Male, age 76, right hemisphere 28.0
1841 Female, age 85, right hemisphere 17.4
1847 Female, age 91, left hemisphere 16.5
1794 Male, age 80, right hemisphere 14.5
2521 Female, age 94, right hemisphere 8.1
Subiculum
nTPM: 15.9
2042 Male, age 76, both hemispheres 24.1
2438 Female, age 94, left hemisphere 16.9
1977 Female, age 85, both hemispheres 15.6
1901 Male, age 80, both hemispheres 15.0
2619 Male, age 74, both hemispheres 15.0
2729 Female, age 91, right hemisphere 9.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.7
Samples: 197

Max nTPM: 425.2
Min nTPM: 3.6
Std nTPM: 55.8
Median nTPM: 23.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 425.2
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 304.6
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 271.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 186.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 177.9
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 170.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 164.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 159.3
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 157.4
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 155.0
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 145.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.3
FF:10153-102I9 76 years, female 29.0
FF:10169-103B7 60 years, female 15.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.3
Samples: 4

Max nTPM: 22.1
Min nTPM: 8.0
Sample A Female 15.0
Sample B Female 8.0
Sample C Male 22.1
Sample D Male 8.2
Entorhinal cortex
nTPM: 34.0
Samples: 4

Max nTPM: 45.3
Min nTPM: 21.3
Sample A Female 45.3
Sample B Female 21.3
Sample C Male 27.9
Sample D Male 41.6
Subiculum
nTPM: 17.3
Samples: 4

Max nTPM: 21.5
Min nTPM: 8.2
Sample A Female 20.1
Sample B Female 8.2
Sample C Male 21.5
Sample D Male 19.2
Ventral hippocampus
nTPM: 13.9
Samples: 4

Max nTPM: 21.4
Min nTPM: 5.9
Sample A Female 6.9
Sample B Female 5.9
Sample C Male 21.2
Sample D Male 21.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.0
Samples: 4

Max nTPM: 109.6
Min nTPM: 22.4
Sample A Male 59.9
Sample B Male 109.6
Sample C Female 22.4
Sample D Female 43.9
Hippocampal formation
nTPM: 31.9
Samples: 4

Max nTPM: 37.5
Min nTPM: 26.9
Sample A Male 33.2
Sample B Male 37.5
Sample C Female 26.9
Sample D Female 30.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.5
1793 Antisense, RP_040507_02_A03, Mouse strain C57BL/6J (56 days, male) 6.5
1792 Antisense, RP_040507_02_A03, Mouse strain C57BL/6J (56 days, male) 4.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.