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ATP5F1E
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:94.0 nTPM
HPA:94.0 nTPM
GTEx:107.1 nTPM
FANTOM5:407.2 Scaled Tags Per Million
Pig:23.9 nTPM
Mouse:521.4 nTPM
Allen mouse:3.4 Expression energy

MIDBRAIN - Annotated protein expression
Pending normal tissue analysis

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 94.0
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 91.4
2411 Female, age 72, unknown 94.5
2019 Male, age 18, unknown 93.4
1870 Female, age 42, unknown 92.6
2219 Male, age 76, both hemispheres 91.4
2828 Female, age 72, unknown 91.2
1827 Male, age 72, unknown 90.9
1830 Male, age 51, unknown 90.5
2666 Male, age 74, left hemisphere 90.2
1833 Male, age 53, unknown 90.1
2586 Male, age 75, left hemisphere 89.2
Dorsal raphe nucleus
nTPM: 91.7
2047 Male, age 72, unknown 92.6
2298 Female, age 72, unknown 92.1
1828 Male, age 53, unknown 92.0
2750 Male, age 76, both hemispheres 91.3
2016 Female, age 72, unknown 90.6
Inferior colliculus
nTPM: 92.1
1890 Male, age 53, unknown 93.2
2097 Female, age 72, unknown 92.8
1848 Female, age 42, unknown 92.5
2849 Male, age 72, unknown 89.9
Median raphe nucleus
nTPM: 90.8
2220 Male, age 76, midline 90.8
Pedunculopontine tegmental nucleus
nTPM: 93.1
2338 Male, age 61, both hemispheres 93.7
2334 Male, age 80, both hemispheres 93.4
1921 Female, age 85, both hemispheres 92.1
Periaquaductal grey, anterior
nTPM: 91.7
1947 Male, age 18, unknown 92.9
2502 Female, age 75, unknown 91.4
1795 Male, age 51, unknown 90.7
Periaquaductal grey, dorsal
nTPM: 91.0
1840 Male, age 53, unknown 93.1
2464 Female, age 72, unknown 90.8
2850 Male, age 76, both hemispheres 90.2
1831 Male, age 72, unknown 89.9
Periaquaductal grey, lateral
nTPM: 90.5
2053 Male, age 18, unknown 91.9
2140 Male, age 76, both hemispheres 89.8
2272 Male, age 74, both hemispheres 89.8
Pretectal area
nTPM: 91.7
2007 Male, age 72, unknown 94.4
1817 Female, age 42, unknown 93.6
1816 Male, age 51, unknown 92.8
1944 Female, age 72, unknown 92.3
2316 Male, age 76, right hemisphere 91.6
2667 Female, age 75, unknown 91.5
1815 Male, age 53, unknown 90.9
2273 Male, age 74, both hemispheres 90.9
2224 Female, age 72, unknown 90.6
2825 Male, age 18, unknown 90.0
2407 Male, age 75, both hemispheres 89.4
Red nucleus
nTPM: 93.4
1821 Female, age 72, unknown 95.5
1865 Male, age 51, unknown 95.2
2503 Female, age 72, unknown 95.0
2769 Male, age 72, unknown 94.1
1904 Male, age 53, unknown 93.9
1954 Female, age 42, unknown 93.9
2227 Male, age 72, unknown 93.5
2725 Female, age 75, unknown 92.8
2588 Male, age 74, left hemisphere 92.6
2785 Male, age 18, unknown 92.4
2823 Male, age 76, right hemisphere 92.3
2584 Male, age 75, left hemisphere 89.1
Substantia nigra
nTPM: 94.0
2409 Female, age 72, unknown 99.0
1851 Male, age 51, unknown 97.2
1916 Female, age 42, unknown 97.1
1889 Female, age 72, unknown 94.3
2590 Female, age 75, unknown 93.2
1941 Male, age 53, unknown 93.1
2241 Male, age 72, unknown 93.0
2665 Male, age 74, both hemispheres 92.0
2699 Male, age 18, unknown 91.5
2583 Male, age 75, right hemisphere 90.0
Superior colliculus
nTPM: 91.3
2587 Male, age 74, left hemisphere 94.0
1895 Male, age 76, right hemisphere 92.5
2668 Female, age 75, unknown 92.3
1913 Female, age 42, unknown 91.5
2087 Female, age 72, unknown 91.4
1995 Male, age 72, unknown 91.3
1796 Male, age 53, unknown 91.0
2261 Male, age 18, unknown 91.0
1839 Male, age 51, unknown 89.7
2664 Male, age 75, both hemispheres 88.3
Ventral tegmental area
nTPM: 94.0
2410 Female, age 72, unknown 98.4
1915 Female, age 42, unknown 95.2
2223 Female, age 72, unknown 93.6
2218 Male, age 76, both hemispheres 92.5
2021 Male, age 53, unknown 92.3
1942 Male, age 51, unknown 91.9

MIDBRAIN - GTEx RNA-seqi
Average nTPM 107.1
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 107.1
Samples: 139

Max nTPM: 232.8
Min nTPM: 34.1
Std nTPM: 33.9
Median nTPM: 97.7
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 232.8
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 214.8
GTEX-1EMGI-0011-R2b-SM-9OSVS 60-69 years, male 193.5
GTEX-1LVAO-0011-R2a-SM-EYYX1 60-69 years, male 189.7
GTEX-1MA7X-0011-R2b-SM-EZ6MT 60-69 years, male 182.1
GTEX-13O3Q-0011-R2b-SM-5KM3K 50-59 years, male 174.3
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 171.9
GTEX-1IGQW-0011-R2b-SM-D4P26 60-69 years, male 169.1
GTEX-1B933-0011-R2b-SM-7IGNM 50-59 years, female 169.0
GTEX-11GS4-0011-R2a-SM-DO942 60-69 years, male 160.2
GTEX-12WSF-0011-R2a-SM-5DUVU 70-79 years, male 159.4
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 407.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 407.2
FF:10158-103A5 76 years, female 407.2

MIDBRAIN - Pig RNA-seqi
Average nTPM 23.9
Pig sample Sample description nTPM
Midbrain
nTPM: 23.0
Samples: 4

Max nTPM: 34.0
Min nTPM: 16.8
Sample A Female 34.0
Sample B Female 21.2
Sample C Male 19.8
Sample D Male 16.8
Periaqueductal gray
nTPM: 16.9
Samples: 3

Max nTPM: 18.2
Min nTPM: 15.0
Sample B Female 18.2
Sample C Male 17.4
Sample D Male 15.0
Substantia nigra
nTPM: 20.7
Samples: 4

Max nTPM: 28.9
Min nTPM: 16.9
Sample A Female 28.9
Sample B Female 19.2
Sample C Male 16.9
Sample D Male 17.9
Superior colliculi
nTPM: 23.9
Samples: 4

Max nTPM: 29.1
Min nTPM: 18.6
Sample A Female 29.1
Sample B Female 24.1
Sample C Male 23.7
Sample D Male 18.6

MIDBRAIN - Mouse RNA-seqi
Average nTPM 521.4
Mouse sample Sample description nTPM
Midbrain
nTPM: 521.5
Samples: 4

Max nTPM: 609.7
Min nTPM: 431.0
Sample A Male 609.7
Sample B Male 482.1
Sample C Female 431.0
Sample D Female 563.0

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 3.4
69173370 Antisense, RP_050329_01_E03, Mouse strain C57BL/6J (56 days, male) 3.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.