ABOUTMENU
HELP
NEWS
STAMBP
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:20.6 nTPM
HPA:20.6 nTPM
GTEx:20.1 nTPM
FANTOM5:32.4 Scaled Tags Per Million
Pig:12.8 nTPM
Mouse:32.6 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035800
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.6
Sample id Sample description nTPM
Hippocampus
nTPM: 19.9
1898 Male, age 80, left hemisphere 21.9
2529 Female, age 94, left hemisphere 20.8
1911 Female, age 85, right hemisphere 20.1
1855 Male, age 76, left hemisphere 19.4
2621 Female, age 67, right hemisphere 18.8
2148 Female, age 91, left hemisphere 18.3
Dentate gyrus
nTPM: 18.9
2530 Female, age 94, left hemisphere 21.1
2010 Male, age 76, both hemispheres 20.2
2528 Male, age 74, both hemispheres 19.0
2246 Female, age 85, both hemispheres 18.9
1927 Female, age 91, both hemispheres 17.7
2531 Female, age 67, both hemispheres 16.3
Entorhinal gyrus
nTPM: 19.7
2117 Female, age 91, right hemisphere 21.7
2764 Male, age 80, right hemisphere 20.5
1938 Female, age 85, left hemisphere 19.8
2686 Male, age 75, right hemisphere 19.5
1787 Male, age 76, left hemisphere 18.6
2613 Female, age 94, left hemisphere 18.2
Hippocampus, CA1
nTPM: 19.1
2749 Male, age 80, left hemisphere 19.6
2082 Female, age 91, right hemisphere 19.3
2527 Male, age 74, both hemispheres 19.3
1873 Female, age 85, both hemispheres 18.9
2045 Male, age 76, both hemispheres 18.5
Hippocampus, CA2
nTPM: 20.5
2249 Male, age 74, both hemispheres 21.5
1940 Female, age 85, left hemisphere 21.0
1892 Male, age 76, both hemispheres 20.6
1963 Male, age 80, left hemisphere 20.3
2113 Female, age 91, right hemisphere 19.9
2437 Female, age 94, left hemisphere 19.5
Hippocampus, CA3
nTPM: 18.5
1867 Male, age 76, both hemispheres 21.4
1891 Female, age 85, both hemispheres 20.6
2137 Male, age 80, left hemisphere 18.9
2436 Male, age 74, both hemispheres 18.1
2620 Female, age 94, left hemisphere 16.8
2861 Female, age 67, both hemispheres 15.5
Parahippocampal cortex
nTPM: 19.2
2532 Female, age 72, left hemisphere 21.6
2018 Male, age 76, both hemispheres 20.5
2692 Male, age 74, both hemispheres 20.0
1850 Male, age 80, both hemispheres 19.9
1933 Female, age 85, both hemispheres 19.6
1990 Female, age 91, right hemisphere 19.2
2245 Female, age 91, both hemispheres 18.1
2250 Female, age 67, right hemisphere 17.7
2693 Female, age 94, both hemispheres 17.6
2622 Female, age 67, right hemisphere 17.4
Perirhinal gyrus
nTPM: 18.0
2848 Male, age 76, right hemisphere 18.8
1794 Male, age 80, right hemisphere 18.0
1841 Female, age 85, right hemisphere 17.9
1847 Female, age 91, left hemisphere 17.9
2521 Female, age 94, right hemisphere 17.5
Subiculum
nTPM: 20.6
2438 Female, age 94, left hemisphere 21.7
1977 Female, age 85, both hemispheres 21.3
1901 Male, age 80, both hemispheres 20.9
2042 Male, age 76, both hemispheres 20.7
2619 Male, age 74, both hemispheres 19.9
2729 Female, age 91, right hemisphere 19.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.1
Samples: 197

Max nTPM: 40.1
Min nTPM: 7.5
Std nTPM: 5.9
Median nTPM: 19.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 40.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 34.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 34.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 32.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 32.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 32.6
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 32.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 31.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 31.3
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 31.2
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 30.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.4
FF:10169-103B7 60 years, female 34.5
FF:10153-102I9 76 years, female 30.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.8
Samples: 4

Max nTPM: 17.1
Min nTPM: 9.6
Sample A Female 17.1
Sample B Female 11.4
Sample C Male 13.1
Sample D Male 9.6
Entorhinal cortex
nTPM: 8.7
Samples: 4

Max nTPM: 9.7
Min nTPM: 6.9
Sample A Female 9.7
Sample B Female 9.3
Sample C Male 8.8
Sample D Male 6.9
Subiculum
nTPM: 8.9
Samples: 4

Max nTPM: 11.1
Min nTPM: 7.9
Sample A Female 11.1
Sample B Female 8.4
Sample C Male 7.9
Sample D Male 8.3
Ventral hippocampus
nTPM: 10.1
Samples: 4

Max nTPM: 10.9
Min nTPM: 9.6
Sample A Female 10.9
Sample B Female 9.6
Sample C Male 9.6
Sample D Male 10.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.6
Samples: 4

Max nTPM: 31.9
Min nTPM: 29.5
Sample A Male 30.2
Sample B Male 29.5
Sample C Female 30.7
Sample D Female 31.9
Hippocampal formation
nTPM: 32.6
Samples: 4

Max nTPM: 34.5
Min nTPM: 30.6
Sample A Male 33.8
Sample B Male 31.5
Sample C Female 34.5
Sample D Female 30.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
413793 Antisense, RP_040809_01_E03, Mouse strain C57BL/6J (56 days, male) 4.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.