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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:11.2 nTPM
HPA:11.2 nTPM
GTEx:11.2 nTPM
FANTOM5:56.4 Scaled Tags Per Million
Pig:8.5 nTPM
Mouse:23.5 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017642
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.2
Sample id Sample description nTPM
Hippocampus
nTPM: 10.1
1898 Male, age 80, left hemisphere 11.2
1911 Female, age 85, right hemisphere 10.4
2621 Female, age 67, right hemisphere 10.4
2148 Female, age 91, left hemisphere 9.7
1855 Male, age 76, left hemisphere 9.6
2529 Female, age 94, left hemisphere 9.3
Dentate gyrus
nTPM: 10.0
1927 Female, age 91, both hemispheres 11.5
2531 Female, age 67, both hemispheres 10.3
2010 Male, age 76, both hemispheres 10.0
2530 Female, age 94, left hemisphere 9.6
2528 Male, age 74, both hemispheres 9.4
2246 Female, age 85, both hemispheres 9.1
Entorhinal gyrus
nTPM: 10.0
1938 Female, age 85, left hemisphere 10.7
2764 Male, age 80, right hemisphere 10.3
1787 Male, age 76, left hemisphere 9.8
2117 Female, age 91, right hemisphere 9.8
2686 Male, age 75, right hemisphere 9.8
2613 Female, age 94, left hemisphere 9.7
Hippocampus, CA1
nTPM: 10.3
2749 Male, age 80, left hemisphere 12.2
1873 Female, age 85, both hemispheres 10.5
2527 Male, age 74, both hemispheres 10.1
2082 Female, age 91, right hemisphere 9.6
2045 Male, age 76, both hemispheres 9.0
Hippocampus, CA2
nTPM: 10.3
1892 Male, age 76, both hemispheres 11.7
1963 Male, age 80, left hemisphere 11.2
2249 Male, age 74, both hemispheres 10.5
2113 Female, age 91, right hemisphere 9.6
1940 Female, age 85, left hemisphere 9.5
2437 Female, age 94, left hemisphere 9.4
Hippocampus, CA3
nTPM: 10.2
2436 Male, age 74, both hemispheres 11.7
2137 Male, age 80, left hemisphere 10.5
1891 Female, age 85, both hemispheres 10.4
1867 Male, age 76, both hemispheres 10.1
2620 Female, age 94, left hemisphere 10.0
2861 Female, age 67, both hemispheres 8.5
Parahippocampal cortex
nTPM: 10.4
1850 Male, age 80, both hemispheres 11.6
2693 Female, age 94, both hemispheres 11.0
1933 Female, age 85, both hemispheres 10.8
2692 Male, age 74, both hemispheres 10.5
2532 Female, age 72, left hemisphere 10.3
1990 Female, age 91, right hemisphere 10.2
2018 Male, age 76, both hemispheres 10.0
2622 Female, age 67, right hemisphere 10.0
2245 Female, age 91, both hemispheres 9.9
2250 Female, age 67, right hemisphere 9.8
Perirhinal gyrus
nTPM: 11.2
1794 Male, age 80, right hemisphere 11.9
1841 Female, age 85, right hemisphere 11.7
1847 Female, age 91, left hemisphere 11.7
2848 Male, age 76, right hemisphere 10.7
2521 Female, age 94, right hemisphere 9.9
Subiculum
nTPM: 9.4
1901 Male, age 80, both hemispheres 10.0
2729 Female, age 91, right hemisphere 9.9
1977 Female, age 85, both hemispheres 9.8
2619 Male, age 74, both hemispheres 9.8
2042 Male, age 76, both hemispheres 8.6
2438 Female, age 94, left hemisphere 8.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.2
Samples: 197

Max nTPM: 23.4
Min nTPM: 6.3
Std nTPM: 2.0
Median nTPM: 11.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 23.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 17.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 16.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 15.0
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 14.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 14.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 14.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 14.4
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 14.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 14.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 14.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.4
FF:10169-103B7 60 years, female 74.2
FF:10153-102I9 76 years, female 38.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.0
Samples: 4

Max nTPM: 8.7
Min nTPM: 7.0
Sample A Female 8.7
Sample B Female 7.8
Sample C Male 8.5
Sample D Male 7.0
Entorhinal cortex
nTPM: 8.5
Samples: 4

Max nTPM: 9.5
Min nTPM: 7.3
Sample A Female 8.3
Sample B Female 9.5
Sample C Male 8.9
Sample D Male 7.3
Subiculum
nTPM: 8.6
Samples: 4

Max nTPM: 10.4
Min nTPM: 7.8
Sample A Female 10.4
Sample B Female 8.0
Sample C Male 7.8
Sample D Male 8.0
Ventral hippocampus
nTPM: 7.4
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.8
Sample A Female 8.5
Sample B Female 7.2
Sample C Male 6.8
Sample D Male 7.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.7
Samples: 4

Max nTPM: 21.3
Min nTPM: 20.1
Sample A Male 21.3
Sample B Male 20.1
Sample C Female 21.3
Sample D Female 20.1
Hippocampal formation
nTPM: 23.6
Samples: 4

Max nTPM: 25.1
Min nTPM: 22.0
Sample A Male 22.0
Sample B Male 25.1
Sample C Female 25.0
Sample D Female 22.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
71020812 Antisense, RP_050505_01_G10, Mouse strain C57BL/6J (56 days, male) 3.6
70919406 Antisense, RP_050713_01_C06, Mouse strain C57BL/6J (56 days, male) 1.6
74509585 Antisense, RP_060207_02_H10, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.