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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:539.2 nTPM
HPA:539.2 nTPM
GTEx:174.2 nTPM
FANTOM5:169.7 Scaled Tags Per Million
Pig:18.9 nTPM
Mouse:421.5 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054359
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 539.2
Sample id Sample description nTPM
Hippocampus
nTPM: 531.7
1898 Male, age 80, left hemisphere 551.4
1855 Male, age 76, left hemisphere 530.4
2529 Female, age 94, left hemisphere 530.3
2621 Female, age 67, right hemisphere 529.8
1911 Female, age 85, right hemisphere 525.2
2148 Female, age 91, left hemisphere 523.1
Dentate gyrus
nTPM: 528.6
2010 Male, age 76, both hemispheres 537.7
1927 Female, age 91, both hemispheres 534.9
2530 Female, age 94, left hemisphere 529.4
2528 Male, age 74, both hemispheres 528.4
2246 Female, age 85, both hemispheres 527.7
2531 Female, age 67, both hemispheres 513.4
Entorhinal gyrus
nTPM: 528.8
1938 Female, age 85, left hemisphere 537.9
2764 Male, age 80, right hemisphere 536.3
1787 Male, age 76, left hemisphere 529.1
2686 Male, age 75, right hemisphere 526.9
2117 Female, age 91, right hemisphere 522.1
2613 Female, age 94, left hemisphere 520.3
Hippocampus, CA1
nTPM: 539.0
2749 Male, age 80, left hemisphere 560.6
2527 Male, age 74, both hemispheres 542.7
1873 Female, age 85, both hemispheres 534.0
2045 Male, age 76, both hemispheres 530.3
2082 Female, age 91, right hemisphere 527.5
Hippocampus, CA2
nTPM: 534.9
1892 Male, age 76, both hemispheres 550.1
2249 Male, age 74, both hemispheres 547.4
1963 Male, age 80, left hemisphere 540.4
2113 Female, age 91, right hemisphere 526.6
2437 Female, age 94, left hemisphere 524.0
1940 Female, age 85, left hemisphere 520.7
Hippocampus, CA3
nTPM: 534.0
2436 Male, age 74, both hemispheres 573.4
2137 Male, age 80, left hemisphere 544.0
1867 Male, age 76, both hemispheres 535.4
1891 Female, age 85, both hemispheres 527.3
2620 Female, age 94, left hemisphere 513.7
2861 Female, age 67, both hemispheres 510.3
Parahippocampal cortex
nTPM: 531.2
1933 Female, age 85, both hemispheres 541.2
1850 Male, age 80, both hemispheres 539.7
1990 Female, age 91, right hemisphere 538.0
2018 Male, age 76, both hemispheres 535.8
2245 Female, age 91, both hemispheres 533.8
2250 Female, age 67, right hemisphere 533.1
2532 Female, age 72, left hemisphere 526.6
2622 Female, age 67, right hemisphere 522.0
2693 Female, age 94, both hemispheres 521.8
2692 Male, age 74, both hemispheres 520.1
Perirhinal gyrus
nTPM: 539.2
1847 Female, age 91, left hemisphere 555.1
1794 Male, age 80, right hemisphere 543.1
1841 Female, age 85, right hemisphere 538.1
2521 Female, age 94, right hemisphere 534.1
2848 Male, age 76, right hemisphere 525.5
Subiculum
nTPM: 525.9
2042 Male, age 76, both hemispheres 536.0
1977 Female, age 85, both hemispheres 535.8
1901 Male, age 80, both hemispheres 533.1
2619 Male, age 74, both hemispheres 526.8
2729 Female, age 91, right hemisphere 519.9
2438 Female, age 94, left hemisphere 503.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 174.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 174.2
Samples: 197

Max nTPM: 535.6
Min nTPM: 73.2
Std nTPM: 57.4
Median nTPM: 168.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 535.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 348.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 342.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 341.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 320.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 317.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 309.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 302.2
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 291.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 283.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 276.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 169.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 169.7
FF:10169-103B7 60 years, female 209.2
FF:10153-102I9 76 years, female 130.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.0
Samples: 4

Max nTPM: 24.2
Min nTPM: 15.1
Sample A Female 24.2
Sample B Female 17.4
Sample C Male 19.1
Sample D Male 15.1
Entorhinal cortex
nTPM: 18.5
Samples: 4

Max nTPM: 23.1
Min nTPM: 15.7
Sample A Female 16.7
Sample B Female 23.1
Sample C Male 18.6
Sample D Male 15.7
Subiculum
nTPM: 16.4
Samples: 4

Max nTPM: 21.6
Min nTPM: 14.1
Sample A Female 21.6
Sample B Female 14.1
Sample C Male 15.3
Sample D Male 14.4
Ventral hippocampus
nTPM: 17.3
Samples: 4

Max nTPM: 20.1
Min nTPM: 12.6
Sample A Female 18.9
Sample B Female 12.6
Sample C Male 20.1
Sample D Male 17.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 421.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 376.6
Samples: 4

Max nTPM: 425.1
Min nTPM: 347.8
Sample A Male 360.3
Sample B Male 373.1
Sample C Female 425.1
Sample D Female 347.8
Hippocampal formation
nTPM: 421.5
Samples: 4

Max nTPM: 455.3
Min nTPM: 388.9
Sample A Male 455.3
Sample B Male 388.9
Sample C Female 441.9
Sample D Female 399.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71763492 Antisense, RP_050921_02_A10, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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