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MBOAT7
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:27.8 nTPM
HPA:27.8 nTPM
GTEx:15.7 nTPM
FANTOM5:55.6 Scaled Tags Per Million
Pig:30.0 nTPM
Mouse:23.3 nTPM
Allen mouse:5.0 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 27.8
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 4.3
1827 Male, age 72, unknown 7.8
2586 Male, age 75, left hemisphere 7.8
2666 Male, age 74, left hemisphere 7.6
2411 Female, age 72, unknown 6.2
2828 Female, age 72, unknown 6.2
1870 Female, age 42, unknown 3.8
1833 Male, age 53, unknown 3.5
1830 Male, age 51, unknown 0.0
2019 Male, age 18, unknown 0.0
2219 Male, age 76, both hemispheres 0.0
Dorsal raphe nucleus
nTPM: 9.9
2298 Female, age 72, unknown 19.0
2750 Male, age 76, both hemispheres 14.7
2047 Male, age 72, unknown 14.1
1828 Male, age 53, unknown 1.8
2016 Female, age 72, unknown 0.0
Inferior colliculus
nTPM: 1.5
2849 Male, age 72, unknown 6.1
1848 Female, age 42, unknown 0.0
1890 Male, age 53, unknown 0.0
2097 Female, age 72, unknown 0.0
Median raphe nucleus
nTPM: 27.8
2220 Male, age 76, midline 27.8
Pedunculopontine tegmental nucleus
nTPM: 8.2
2334 Male, age 80, both hemispheres 16.1
1921 Female, age 85, both hemispheres 5.9
2338 Male, age 61, both hemispheres 2.4
Periaquaductal grey, anterior
nTPM: 13.9
1947 Male, age 18, unknown 16.4
1795 Male, age 51, unknown 15.8
2502 Female, age 75, unknown 9.6
Periaquaductal grey, dorsal
nTPM: 7.4
2850 Male, age 76, both hemispheres 12.3
1840 Male, age 53, unknown 8.8
2464 Female, age 72, unknown 6.2
1831 Male, age 72, unknown 2.4
Periaquaductal grey, lateral
nTPM: 8.8
2272 Male, age 74, both hemispheres 12.3
2140 Male, age 76, both hemispheres 8.7
2053 Male, age 18, unknown 5.5
Pretectal area
nTPM: 5.6
2825 Male, age 18, unknown 18.6
2224 Female, age 72, unknown 16.6
1816 Male, age 51, unknown 9.7
1944 Female, age 72, unknown 6.6
2667 Female, age 75, unknown 4.9
2273 Male, age 74, both hemispheres 4.6
1815 Male, age 53, unknown 0.5
2007 Male, age 72, unknown 0.5
1817 Female, age 42, unknown 0.0
2316 Male, age 76, right hemisphere 0.0
2407 Male, age 75, both hemispheres 0.0
Red nucleus
nTPM: 0.1
2584 Male, age 75, left hemisphere 2.0
1821 Female, age 72, unknown 0.0
1865 Male, age 51, unknown 0.0
1904 Male, age 53, unknown 0.0
1954 Female, age 42, unknown 0.0
2227 Male, age 72, unknown 0.0
2503 Female, age 72, unknown 0.0
2588 Male, age 74, left hemisphere 0.0
2725 Female, age 75, unknown 0.0
2769 Male, age 72, unknown 0.0
2785 Male, age 18, unknown 0.0
2823 Male, age 76, right hemisphere 0.0
Substantia nigra
nTPM: 1.8
1941 Male, age 53, unknown 6.9
1916 Female, age 42, unknown 5.5
2699 Male, age 18, unknown 2.4
1851 Male, age 51, unknown 1.9
2665 Male, age 74, both hemispheres 1.3
1889 Female, age 72, unknown 0.5
2241 Male, age 72, unknown 0.0
2409 Female, age 72, unknown 0.0
2583 Male, age 75, right hemisphere 0.0
2590 Female, age 75, unknown 0.0
Superior colliculus
nTPM: 4.5
2261 Male, age 18, unknown 19.5
1796 Male, age 53, unknown 8.2
2087 Female, age 72, unknown 7.0
2664 Male, age 75, both hemispheres 4.7
1839 Male, age 51, unknown 4.0
2668 Female, age 75, unknown 1.8
1895 Male, age 76, right hemisphere 0.0
1913 Female, age 42, unknown 0.0
1995 Male, age 72, unknown 0.0
2587 Male, age 74, left hemisphere 0.0
Ventral tegmental area
nTPM: 6.3
2218 Male, age 76, both hemispheres 11.7
2021 Male, age 53, unknown 8.0
1942 Male, age 51, unknown 5.5
2410 Female, age 72, unknown 5.0
1915 Female, age 42, unknown 4.7
2223 Female, age 72, unknown 2.6

MIDBRAIN - GTEx RNA-seqi
Average nTPM 15.7
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 15.7
Samples: 139

Max nTPM: 51.6
Min nTPM: 3.5
Std nTPM: 8.6
Median nTPM: 13.3
GTEX-15ER7-0011-R2a-SM-6M46O 20-29 years, female 51.6
GTEX-1HB9E-0011-R2b-SM-A96RW 50-59 years, male 42.3
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 41.9
GTEX-13OVJ-0011-R2b-SM-5L3GP 50-59 years, female 37.6
GTEX-15CHQ-0011-R2b-SM-6AJAD 60-69 years, male 34.0
GTEX-13OW6-0011-R2a-SM-5L3HG 50-59 years, male 33.9
GTEX-WHSE-0011-R2A-SM-3P5ZL 20-29 years, male 32.1
GTEX-T5JC-0011-R2A-SM-32PLZ 20-29 years, male 30.3
GTEX-N7MS-0011-R2a-SM-2HML6 60-69 years, male 29.8
GTEX-OXRO-0011-R2A-SM-3NB1W 60-69 years, female 29.6
GTEX-1B8L1-0011-R2a-SM-9OSVL 60-69 years, male 29.4
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 55.6
FF:10158-103A5 76 years, female 55.6

MIDBRAIN - Pig RNA-seqi
Average nTPM 30.0
Pig sample Sample description nTPM
Midbrain
nTPM: 25.6
Samples: 4

Max nTPM: 28.9
Min nTPM: 23.0
Sample A Female 27.6
Sample B Female 23.0
Sample C Male 23.0
Sample D Male 28.9
Periaqueductal gray
nTPM: 25.4
Samples: 3

Max nTPM: 32.3
Min nTPM: 21.8
Sample B Female 21.8
Sample C Male 32.3
Sample D Male 22.1
Substantia nigra
nTPM: 30.0
Samples: 4

Max nTPM: 39.2
Min nTPM: 16.0
Sample A Female 38.9
Sample B Female 25.9
Sample C Male 39.2
Sample D Male 16.0
Superior colliculi
nTPM: 22.2
Samples: 4

Max nTPM: 31.4
Min nTPM: 17.1
Sample A Female 31.4
Sample B Female 19.0
Sample C Male 17.1
Sample D Male 21.1

MIDBRAIN - Mouse RNA-seqi
Average nTPM 23.3
Mouse sample Sample description nTPM
Midbrain
nTPM: 23.3
Samples: 4

Max nTPM: 25.7
Min nTPM: 20.5
Sample A Male 24.3
Sample B Male 25.7
Sample C Female 20.5
Sample D Female 22.5

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 5.0
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 5.0
72081696 Antisense, RP_051012_04_B10, Mouse strain C57BL/6J (56 days, male) 5.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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