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RBCK1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:20.2 nTPM
HPA:20.2 nTPM
GTEx:32.6 nTPM
FANTOM5:58.0 Scaled Tags Per Million
Pig:8.9 nTPM
Mouse:46.3 nTPM
Allen mouse:14.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.2
Sample id Sample description nTPM
Hippocampus
nTPM: 17.2
2148 Female, age 91, left hemisphere 19.3
2529 Female, age 94, left hemisphere 18.3
1855 Male, age 76, left hemisphere 17.5
2621 Female, age 67, right hemisphere 17.2
1898 Male, age 80, left hemisphere 15.4
1911 Female, age 85, right hemisphere 15.3
Dentate gyrus
nTPM: 20.1
2246 Female, age 85, both hemispheres 24.2
2528 Male, age 74, both hemispheres 23.8
2531 Female, age 67, both hemispheres 20.9
2010 Male, age 76, both hemispheres 18.6
2530 Female, age 94, left hemisphere 17.8
1927 Female, age 91, both hemispheres 15.4
Entorhinal gyrus
nTPM: 17.6
2117 Female, age 91, right hemisphere 19.2
1787 Male, age 76, left hemisphere 17.9
2764 Male, age 80, right hemisphere 17.8
2686 Male, age 75, right hemisphere 17.1
1938 Female, age 85, left hemisphere 16.9
2613 Female, age 94, left hemisphere 16.9
Hippocampus, CA1
nTPM: 20.2
2082 Female, age 91, right hemisphere 25.6
2045 Male, age 76, both hemispheres 24.0
1873 Female, age 85, both hemispheres 19.4
2527 Male, age 74, both hemispheres 18.1
2749 Male, age 80, left hemisphere 13.7
Hippocampus, CA2
nTPM: 17.6
2113 Female, age 91, right hemisphere 22.8
2437 Female, age 94, left hemisphere 17.7
1940 Female, age 85, left hemisphere 17.1
2249 Male, age 74, both hemispheres 16.9
1963 Male, age 80, left hemisphere 16.5
1892 Male, age 76, both hemispheres 14.6
Hippocampus, CA3
nTPM: 19.8
2620 Female, age 94, left hemisphere 24.2
2861 Female, age 67, both hemispheres 22.4
2436 Male, age 74, both hemispheres 19.4
1891 Female, age 85, both hemispheres 18.2
2137 Male, age 80, left hemisphere 17.6
1867 Male, age 76, both hemispheres 17.1
Parahippocampal cortex
nTPM: 18.4
2622 Female, age 67, right hemisphere 24.2
2245 Female, age 91, both hemispheres 20.0
2692 Male, age 74, both hemispheres 20.0
2018 Male, age 76, both hemispheres 19.6
2532 Female, age 72, left hemisphere 19.2
2693 Female, age 94, both hemispheres 18.1
1990 Female, age 91, right hemisphere 16.3
1933 Female, age 85, both hemispheres 15.7
1850 Male, age 80, both hemispheres 15.6
2250 Female, age 67, right hemisphere 15.5
Perirhinal gyrus
nTPM: 15.8
2521 Female, age 94, right hemisphere 17.0
2848 Male, age 76, right hemisphere 16.5
1794 Male, age 80, right hemisphere 15.4
1841 Female, age 85, right hemisphere 15.4
1847 Female, age 91, left hemisphere 14.8
Subiculum
nTPM: 18.6
2619 Male, age 74, both hemispheres 20.3
1901 Male, age 80, both hemispheres 19.9
2042 Male, age 76, both hemispheres 19.1
2729 Female, age 91, right hemisphere 18.4
2438 Female, age 94, left hemisphere 18.1
1977 Female, age 85, both hemispheres 15.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.6
Samples: 197

Max nTPM: 65.3
Min nTPM: 18.0
Std nTPM: 7.0
Median nTPM: 32.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 65.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 59.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 53.6
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 51.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 48.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 48.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 47.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 47.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 46.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 46.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 46.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 58.0
FF:10153-102I9 76 years, female 59.5
FF:10169-103B7 60 years, female 56.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.7
Samples: 4

Max nTPM: 11.0
Min nTPM: 6.9
Sample A Female 11.0
Sample B Female 8.2
Sample C Male 8.8
Sample D Male 6.9
Entorhinal cortex
nTPM: 8.3
Samples: 4

Max nTPM: 9.8
Min nTPM: 6.1
Sample A Female 8.1
Sample B Female 9.8
Sample C Male 9.0
Sample D Male 6.1
Subiculum
nTPM: 8.4
Samples: 4

Max nTPM: 10.6
Min nTPM: 7.1
Sample A Female 10.6
Sample B Female 8.2
Sample C Male 7.1
Sample D Male 7.5
Ventral hippocampus
nTPM: 8.9
Samples: 4

Max nTPM: 10.5
Min nTPM: 7.7
Sample A Female 9.4
Sample B Female 7.7
Sample C Male 10.5
Sample D Male 8.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.3
Samples: 4

Max nTPM: 48.1
Min nTPM: 44.5
Sample A Male 47.7
Sample B Male 48.1
Sample C Female 44.5
Sample D Female 44.8
Hippocampal formation
nTPM: 43.6
Samples: 4

Max nTPM: 46.5
Min nTPM: 39.8
Sample A Male 45.8
Sample B Male 42.2
Sample C Female 39.8
Sample D Female 46.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.4
68632166 Antisense, RP_050125_01_G10, Mouse strain C57BL/6J (56 days, male) 14.4

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