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SNRPB2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:24.9 nTPM
HPA:24.9 nTPM
GTEx:26.4 nTPM
FANTOM5:100.2 Scaled Tags Per Million
Pig:24.3 nTPM
Mouse:24.9 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA076104
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.9
Sample id Sample description nTPM
Hippocampus
nTPM: 24.9
2621 Female, age 67, right hemisphere 26.5
1898 Male, age 80, left hemisphere 25.5
1911 Female, age 85, right hemisphere 25.3
1855 Male, age 76, left hemisphere 25.0
2529 Female, age 94, left hemisphere 24.4
2148 Female, age 91, left hemisphere 22.5
Dentate gyrus
nTPM: 23.9
2010 Male, age 76, both hemispheres 25.6
1927 Female, age 91, both hemispheres 24.9
2246 Female, age 85, both hemispheres 24.5
2531 Female, age 67, both hemispheres 23.4
2530 Female, age 94, left hemisphere 23.0
2528 Male, age 74, both hemispheres 21.7
Entorhinal gyrus
nTPM: 22.8
1938 Female, age 85, left hemisphere 24.9
1787 Male, age 76, left hemisphere 23.8
2117 Female, age 91, right hemisphere 23.4
2764 Male, age 80, right hemisphere 22.1
2686 Male, age 75, right hemisphere 21.5
2613 Female, age 94, left hemisphere 20.9
Hippocampus, CA1
nTPM: 24.9
2749 Male, age 80, left hemisphere 27.0
1873 Female, age 85, both hemispheres 25.6
2045 Male, age 76, both hemispheres 25.3
2527 Male, age 74, both hemispheres 24.7
2082 Female, age 91, right hemisphere 21.8
Hippocampus, CA2
nTPM: 24.2
1892 Male, age 76, both hemispheres 26.7
2249 Male, age 74, both hemispheres 25.6
1963 Male, age 80, left hemisphere 24.4
1940 Female, age 85, left hemisphere 23.4
2113 Female, age 91, right hemisphere 22.7
2437 Female, age 94, left hemisphere 22.6
Hippocampus, CA3
nTPM: 24.6
2137 Male, age 80, left hemisphere 26.3
1867 Male, age 76, both hemispheres 25.9
2436 Male, age 74, both hemispheres 25.1
1891 Female, age 85, both hemispheres 24.2
2861 Female, age 67, both hemispheres 23.1
2620 Female, age 94, left hemisphere 23.0
Parahippocampal cortex
nTPM: 23.8
2018 Male, age 76, both hemispheres 25.5
2250 Female, age 67, right hemisphere 25.1
1933 Female, age 85, both hemispheres 24.7
2245 Female, age 91, both hemispheres 24.3
1850 Male, age 80, both hemispheres 24.1
2532 Female, age 72, left hemisphere 23.8
1990 Female, age 91, right hemisphere 23.0
2692 Male, age 74, both hemispheres 22.8
2693 Female, age 94, both hemispheres 22.6
2622 Female, age 67, right hemisphere 22.5
Perirhinal gyrus
nTPM: 23.8
1841 Female, age 85, right hemisphere 24.6
2521 Female, age 94, right hemisphere 24.1
2848 Male, age 76, right hemisphere 24.0
1794 Male, age 80, right hemisphere 23.3
1847 Female, age 91, left hemisphere 23.1
Subiculum
nTPM: 23.8
2042 Male, age 76, both hemispheres 25.7
1901 Male, age 80, both hemispheres 24.8
1977 Female, age 85, both hemispheres 23.7
2619 Male, age 74, both hemispheres 23.1
2438 Female, age 94, left hemisphere 22.7
2729 Female, age 91, right hemisphere 22.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.4
Samples: 197

Max nTPM: 47.2
Min nTPM: 16.4
Std nTPM: 5.4
Median nTPM: 25.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 47.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 43.3
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 42.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 40.8
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 40.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 39.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 38.5
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 37.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 36.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 36.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 36.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.2
FF:10169-103B7 60 years, female 126.6
FF:10153-102I9 76 years, female 73.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.4
Samples: 4

Max nTPM: 32.1
Min nTPM: 18.8
Sample A Female 32.1
Sample B Female 25.4
Sample C Male 21.2
Sample D Male 18.8
Entorhinal cortex
nTPM: 19.2
Samples: 4

Max nTPM: 22.4
Min nTPM: 14.1
Sample A Female 20.2
Sample B Female 22.4
Sample C Male 20.2
Sample D Male 14.1
Subiculum
nTPM: 21.1
Samples: 4

Max nTPM: 25.9
Min nTPM: 15.6
Sample A Female 25.9
Sample B Female 20.5
Sample C Male 15.6
Sample D Male 22.4
Ventral hippocampus
nTPM: 20.2
Samples: 4

Max nTPM: 23.9
Min nTPM: 16.0
Sample A Female 23.2
Sample B Female 16.0
Sample C Male 17.5
Sample D Male 23.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.9
Samples: 4

Max nTPM: 27.0
Min nTPM: 21.5
Sample A Male 21.5
Sample B Male 25.0
Sample C Female 27.0
Sample D Female 26.1
Hippocampal formation
nTPM: 23.9
Samples: 4

Max nTPM: 26.3
Min nTPM: 21.8
Sample A Male 26.3
Sample B Male 23.0
Sample C Female 24.5
Sample D Female 21.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
68633404 Antisense, RP_050125_02_G08, Mouse strain C57BL/6J (56 days, male) 1.3

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