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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:165.5 nTPM
HPA:165.5 nTPM
GTEx:127.0 nTPM
FANTOM5:42.6 Scaled Tags Per Million
Pig:96.4 nTPM
Mouse:65.8 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012782
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 165.5
Sample id Sample description nTPM
Hippocampus
nTPM: 163.1
1898 Male, age 80, left hemisphere 171.2
2529 Female, age 94, left hemisphere 167.0
1855 Male, age 76, left hemisphere 162.4
1911 Female, age 85, right hemisphere 160.3
2148 Female, age 91, left hemisphere 159.6
2621 Female, age 67, right hemisphere 158.3
Dentate gyrus
nTPM: 163.5
2010 Male, age 76, both hemispheres 170.3
2528 Male, age 74, both hemispheres 168.0
2530 Female, age 94, left hemisphere 164.8
1927 Female, age 91, both hemispheres 161.0
2246 Female, age 85, both hemispheres 158.6
2531 Female, age 67, both hemispheres 158.0
Entorhinal gyrus
nTPM: 160.4
2117 Female, age 91, right hemisphere 164.7
2764 Male, age 80, right hemisphere 162.8
1787 Male, age 76, left hemisphere 161.6
2686 Male, age 75, right hemisphere 159.1
1938 Female, age 85, left hemisphere 158.6
2613 Female, age 94, left hemisphere 155.3
Hippocampus, CA1
nTPM: 163.7
2749 Male, age 80, left hemisphere 170.3
2527 Male, age 74, both hemispheres 163.1
2082 Female, age 91, right hemisphere 162.7
2045 Male, age 76, both hemispheres 162.4
1873 Female, age 85, both hemispheres 159.9
Hippocampus, CA2
nTPM: 165.5
1963 Male, age 80, left hemisphere 175.6
2249 Male, age 74, both hemispheres 171.0
1892 Male, age 76, both hemispheres 162.9
2437 Female, age 94, left hemisphere 162.1
2113 Female, age 91, right hemisphere 161.3
1940 Female, age 85, left hemisphere 160.4
Hippocampus, CA3
nTPM: 161.5
2436 Male, age 74, both hemispheres 172.5
1867 Male, age 76, both hemispheres 163.4
2137 Male, age 80, left hemisphere 160.2
1891 Female, age 85, both hemispheres 159.1
2620 Female, age 94, left hemisphere 157.8
2861 Female, age 67, both hemispheres 156.2
Parahippocampal cortex
nTPM: 158.8
2018 Male, age 76, both hemispheres 165.5
1933 Female, age 85, both hemispheres 162.2
1990 Female, age 91, right hemisphere 161.0
2250 Female, age 67, right hemisphere 160.9
2245 Female, age 91, both hemispheres 160.1
1850 Male, age 80, both hemispheres 159.3
2532 Female, age 72, left hemisphere 158.2
2622 Female, age 67, right hemisphere 156.1
2692 Male, age 74, both hemispheres 153.9
2693 Female, age 94, both hemispheres 150.9
Perirhinal gyrus
nTPM: 160.6
1794 Male, age 80, right hemisphere 166.0
1847 Female, age 91, left hemisphere 161.9
1841 Female, age 85, right hemisphere 160.8
2521 Female, age 94, right hemisphere 160.3
2848 Male, age 76, right hemisphere 153.9
Subiculum
nTPM: 161.2
1901 Male, age 80, both hemispheres 164.7
1977 Female, age 85, both hemispheres 163.3
2438 Female, age 94, left hemisphere 161.6
2042 Male, age 76, both hemispheres 160.4
2729 Female, age 91, right hemisphere 159.2
2619 Male, age 74, both hemispheres 157.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 127.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 127.0
Samples: 197

Max nTPM: 337.1
Min nTPM: 51.0
Std nTPM: 35.4
Median nTPM: 122.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 337.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 239.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 239.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 238.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 235.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 214.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 207.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 202.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 193.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 188.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 181.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.6
FF:10169-103B7 60 years, female 48.1
FF:10153-102I9 76 years, female 37.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 96.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 96.4
Samples: 4

Max nTPM: 127.4
Min nTPM: 75.7
Sample A Female 127.4
Sample B Female 90.8
Sample C Male 91.5
Sample D Male 75.7
Entorhinal cortex
nTPM: 80.3
Samples: 4

Max nTPM: 97.6
Min nTPM: 57.7
Sample A Female 77.5
Sample B Female 97.6
Sample C Male 88.3
Sample D Male 57.7
Subiculum
nTPM: 78.0
Samples: 4

Max nTPM: 108.6
Min nTPM: 63.3
Sample A Female 108.6
Sample B Female 72.8
Sample C Male 67.3
Sample D Male 63.3
Ventral hippocampus
nTPM: 87.6
Samples: 4

Max nTPM: 110.5
Min nTPM: 63.8
Sample A Female 91.1
Sample B Female 63.8
Sample C Male 110.5
Sample D Male 85.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.1
Samples: 4

Max nTPM: 66.6
Min nTPM: 52.4
Sample A Male 55.0
Sample B Male 66.6
Sample C Female 66.2
Sample D Female 52.4
Hippocampal formation
nTPM: 65.8
Samples: 4

Max nTPM: 74.3
Min nTPM: 59.5
Sample A Male 64.3
Sample B Male 59.5
Sample C Female 65.1
Sample D Female 74.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
70303761 Antisense, RP_050609_02_D07, Mouse strain C57BL/6J (56 days, male) 3.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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