ABOUTMENU
HELP
NEWS
MCF2L
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:32.3 nTPM
HPA:32.3 nTPM
GTEx:37.1 nTPM
FANTOM5:111.5 Scaled Tags Per Million
Pig:28.7 nTPM
Mouse:56.9 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.3
Sample id Sample description nTPM
Hippocampus
nTPM: 20.6
2529 Female, age 94, left hemisphere 37.9
2148 Female, age 91, left hemisphere 26.1
2621 Female, age 67, right hemisphere 20.7
1855 Male, age 76, left hemisphere 16.4
1898 Male, age 80, left hemisphere 11.5
1911 Female, age 85, right hemisphere 11.2
Dentate gyrus
nTPM: 27.6
2530 Female, age 94, left hemisphere 43.5
2531 Female, age 67, both hemispheres 39.8
2246 Female, age 85, both hemispheres 27.8
2528 Male, age 74, both hemispheres 20.9
2010 Male, age 76, both hemispheres 18.2
1927 Female, age 91, both hemispheres 15.1
Entorhinal gyrus
nTPM: 32.3
2613 Female, age 94, left hemisphere 50.6
2686 Male, age 75, right hemisphere 42.6
2764 Male, age 80, right hemisphere 32.8
1938 Female, age 85, left hemisphere 27.7
1787 Male, age 76, left hemisphere 24.1
2117 Female, age 91, right hemisphere 15.8
Hippocampus, CA1
nTPM: 20.5
2045 Male, age 76, both hemispheres 29.3
2527 Male, age 74, both hemispheres 21.8
1873 Female, age 85, both hemispheres 20.1
2082 Female, age 91, right hemisphere 18.3
2749 Male, age 80, left hemisphere 12.8
Hippocampus, CA2
nTPM: 25.8
2437 Female, age 94, left hemisphere 44.6
1940 Female, age 85, left hemisphere 27.3
1892 Male, age 76, both hemispheres 25.9
1963 Male, age 80, left hemisphere 24.7
2113 Female, age 91, right hemisphere 20.6
2249 Male, age 74, both hemispheres 11.7
Hippocampus, CA3
nTPM: 25.6
2620 Female, age 94, left hemisphere 52.0
2861 Female, age 67, both hemispheres 38.2
1867 Male, age 76, both hemispheres 24.4
2436 Male, age 74, both hemispheres 15.5
1891 Female, age 85, both hemispheres 14.3
2137 Male, age 80, left hemisphere 9.4
Parahippocampal cortex
nTPM: 30.7
2622 Female, age 67, right hemisphere 63.3
2532 Female, age 72, left hemisphere 35.3
2018 Male, age 76, both hemispheres 32.3
2692 Male, age 74, both hemispheres 30.5
2693 Female, age 94, both hemispheres 29.6
2250 Female, age 67, right hemisphere 29.0
1933 Female, age 85, both hemispheres 26.4
1990 Female, age 91, right hemisphere 23.9
2245 Female, age 91, both hemispheres 18.8
1850 Male, age 80, both hemispheres 18.2
Perirhinal gyrus
nTPM: 24.3
1841 Female, age 85, right hemisphere 34.6
2848 Male, age 76, right hemisphere 27.3
2521 Female, age 94, right hemisphere 20.4
1847 Female, age 91, left hemisphere 20.2
1794 Male, age 80, right hemisphere 18.8
Subiculum
nTPM: 27.7
2438 Female, age 94, left hemisphere 35.9
2619 Male, age 74, both hemispheres 33.2
2729 Female, age 91, right hemisphere 30.0
1977 Female, age 85, both hemispheres 24.5
2042 Male, age 76, both hemispheres 22.6
1901 Male, age 80, both hemispheres 20.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.1
Samples: 197

Max nTPM: 97.1
Min nTPM: 14.0
Std nTPM: 13.8
Median nTPM: 34.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 97.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 92.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 91.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 83.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 81.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 66.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 65.0
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 65.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 64.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 61.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 60.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 111.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 111.5
FF:10153-102I9 76 years, female 156.1
FF:10169-103B7 60 years, female 66.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 22.3
Min nTPM: 16.2
Sample A Female 16.3
Sample B Female 20.8
Sample C Male 16.2
Sample D Male 22.3
Entorhinal cortex
nTPM: 28.7
Samples: 4

Max nTPM: 32.5
Min nTPM: 26.0
Sample A Female 27.7
Sample B Female 28.5
Sample C Male 26.0
Sample D Male 32.5
Subiculum
nTPM: 23.5
Samples: 4

Max nTPM: 29.7
Min nTPM: 18.8
Sample A Female 29.7
Sample B Female 21.8
Sample C Male 23.6
Sample D Male 18.8
Ventral hippocampus
nTPM: 21.6
Samples: 4

Max nTPM: 24.9
Min nTPM: 17.0
Sample A Female 17.0
Sample B Female 21.5
Sample C Male 24.9
Sample D Male 23.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.9
Samples: 4

Max nTPM: 63.6
Min nTPM: 53.5
Sample A Male 53.5
Sample B Male 56.0
Sample C Female 63.6
Sample D Female 54.5
Hippocampal formation
nTPM: 50.9
Samples: 4

Max nTPM: 55.8
Min nTPM: 45.7
Sample A Male 54.2
Sample B Male 47.7
Sample C Female 45.7
Sample D Female 55.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
71789807 Antisense, RP_050921_03_F07, Mouse strain C57BL/6J (56 days, male) 2.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.