ABOUTMENU
HELP
NEWS
SBDS
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:133.1 nTPM
HPA:133.1 nTPM
GTEx:126.7 nTPM
FANTOM5:205.7 Scaled Tags Per Million
Pig:68.3 nTPM
Mouse:73.7 nTPM
Allen mouse:13.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028891
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 133.1
Sample id Sample description nTPM
Hippocampus
nTPM: 130.3
1898 Male, age 80, left hemisphere 137.0
2529 Female, age 94, left hemisphere 134.9
1855 Male, age 76, left hemisphere 129.8
1911 Female, age 85, right hemisphere 128.1
2621 Female, age 67, right hemisphere 127.4
2148 Female, age 91, left hemisphere 124.6
Dentate gyrus
nTPM: 129.1
2010 Male, age 76, both hemispheres 136.9
2530 Female, age 94, left hemisphere 132.3
2246 Female, age 85, both hemispheres 130.0
2528 Male, age 74, both hemispheres 127.5
1927 Female, age 91, both hemispheres 126.5
2531 Female, age 67, both hemispheres 121.7
Entorhinal gyrus
nTPM: 126.6
2117 Female, age 91, right hemisphere 133.2
1938 Female, age 85, left hemisphere 131.2
2764 Male, age 80, right hemisphere 128.2
1787 Male, age 76, left hemisphere 126.1
2686 Male, age 75, right hemisphere 122.0
2613 Female, age 94, left hemisphere 118.8
Hippocampus, CA1
nTPM: 132.3
2749 Male, age 80, left hemisphere 144.2
2527 Male, age 74, both hemispheres 134.5
1873 Female, age 85, both hemispheres 130.7
2045 Male, age 76, both hemispheres 127.0
2082 Female, age 91, right hemisphere 125.2
Hippocampus, CA2
nTPM: 130.6
2249 Male, age 74, both hemispheres 136.5
1963 Male, age 80, left hemisphere 135.3
1892 Male, age 76, both hemispheres 133.6
2437 Female, age 94, left hemisphere 128.3
2113 Female, age 91, right hemisphere 125.9
1940 Female, age 85, left hemisphere 124.2
Hippocampus, CA3
nTPM: 128.6
2137 Male, age 80, left hemisphere 139.4
1867 Male, age 76, both hemispheres 134.6
1891 Female, age 85, both hemispheres 132.5
2436 Male, age 74, both hemispheres 127.8
2620 Female, age 94, left hemisphere 122.3
2861 Female, age 67, both hemispheres 115.1
Parahippocampal cortex
nTPM: 125.8
1850 Male, age 80, both hemispheres 130.1
1990 Female, age 91, right hemisphere 130.1
2018 Male, age 76, both hemispheres 129.7
2245 Female, age 91, both hemispheres 129.0
2532 Female, age 72, left hemisphere 128.6
1933 Female, age 85, both hemispheres 125.7
2692 Male, age 74, both hemispheres 124.8
2250 Female, age 67, right hemisphere 124.2
2693 Female, age 94, both hemispheres 120.8
2622 Female, age 67, right hemisphere 115.0
Perirhinal gyrus
nTPM: 128.2
1794 Male, age 80, right hemisphere 131.1
1841 Female, age 85, right hemisphere 130.6
1847 Female, age 91, left hemisphere 128.0
2521 Female, age 94, right hemisphere 126.2
2848 Male, age 76, right hemisphere 125.0
Subiculum
nTPM: 133.1
1901 Male, age 80, both hemispheres 138.6
1977 Female, age 85, both hemispheres 137.1
2042 Male, age 76, both hemispheres 136.0
2438 Female, age 94, left hemisphere 134.3
2619 Male, age 74, both hemispheres 128.4
2729 Female, age 91, right hemisphere 124.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 126.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 126.7
Samples: 197

Max nTPM: 204.7
Min nTPM: 70.7
Std nTPM: 24.6
Median nTPM: 123.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 204.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 204.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 204.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 189.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 186.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 182.3
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 182.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 179.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 175.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 172.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 172.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 205.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 205.7
FF:10169-103B7 60 years, female 242.7
FF:10153-102I9 76 years, female 168.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 68.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 68.3
Samples: 4

Max nTPM: 86.2
Min nTPM: 52.1
Sample A Female 86.2
Sample B Female 64.6
Sample C Male 70.4
Sample D Male 52.1
Entorhinal cortex
nTPM: 57.0
Samples: 4

Max nTPM: 66.8
Min nTPM: 48.9
Sample A Female 53.7
Sample B Female 66.8
Sample C Male 58.7
Sample D Male 48.9
Subiculum
nTPM: 61.4
Samples: 4

Max nTPM: 76.9
Min nTPM: 52.5
Sample A Female 76.9
Sample B Female 55.5
Sample C Male 52.5
Sample D Male 60.8
Ventral hippocampus
nTPM: 61.1
Samples: 4

Max nTPM: 68.4
Min nTPM: 52.8
Sample A Female 68.4
Sample B Female 52.8
Sample C Male 59.8
Sample D Male 63.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.7
Samples: 4

Max nTPM: 80.8
Min nTPM: 67.2
Sample A Male 74.7
Sample B Male 80.8
Sample C Female 72.0
Sample D Female 67.2
Hippocampal formation
nTPM: 68.3
Samples: 4

Max nTPM: 72.5
Min nTPM: 62.7
Sample A Male 72.5
Sample B Male 66.7
Sample C Female 62.7
Sample D Female 71.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.8
68269276 Antisense, RP_041208_02_A10, Mouse strain C57BL/6J (56 days, male) 13.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.