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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:13.8 nTPM
HPA:13.8 nTPM
GTEx:115.5 nTPM
FANTOM5:404.3 Scaled Tags Per Million
Pig:166.7 nTPM
Mouse:199.1 nTPM
Allen mouse:22.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009433Antibody HPA009696Antibody CAB004738
Glial cells HighMediumHigh
Neuronal cells HighLowHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.8
Sample id Sample description nTPM
Hippocampus
nTPM: 11.8
2148 Female, age 91, left hemisphere 15.8
2529 Female, age 94, left hemisphere 12.8
1898 Male, age 80, left hemisphere 12.3
2621 Female, age 67, right hemisphere 11.4
1911 Female, age 85, right hemisphere 9.9
1855 Male, age 76, left hemisphere 8.6
Dentate gyrus
nTPM: 9.9
2246 Female, age 85, both hemispheres 16.5
2010 Male, age 76, both hemispheres 10.9
1927 Female, age 91, both hemispheres 9.6
2528 Male, age 74, both hemispheres 9.0
2530 Female, age 94, left hemisphere 7.4
2531 Female, age 67, both hemispheres 5.9
Entorhinal gyrus
nTPM: 10.1
2764 Male, age 80, right hemisphere 15.4
1938 Female, age 85, left hemisphere 11.4
2117 Female, age 91, right hemisphere 10.9
2613 Female, age 94, left hemisphere 10.1
1787 Male, age 76, left hemisphere 8.1
2686 Male, age 75, right hemisphere 4.7
Hippocampus, CA1
nTPM: 13.4
2527 Male, age 74, both hemispheres 16.3
1873 Female, age 85, both hemispheres 15.5
2082 Female, age 91, right hemisphere 13.9
2749 Male, age 80, left hemisphere 12.0
2045 Male, age 76, both hemispheres 9.1
Hippocampus, CA2
nTPM: 12.9
2249 Male, age 74, both hemispheres 21.4
1963 Male, age 80, left hemisphere 12.7
2113 Female, age 91, right hemisphere 11.8
1940 Female, age 85, left hemisphere 11.7
1892 Male, age 76, both hemispheres 11.2
2437 Female, age 94, left hemisphere 8.7
Hippocampus, CA3
nTPM: 10.8
2436 Male, age 74, both hemispheres 21.9
2620 Female, age 94, left hemisphere 15.8
1891 Female, age 85, both hemispheres 9.9
1867 Male, age 76, both hemispheres 9.5
2137 Male, age 80, left hemisphere 6.6
2861 Female, age 67, both hemispheres 1.2
Parahippocampal cortex
nTPM: 10.5
1850 Male, age 80, both hemispheres 14.1
2532 Female, age 72, left hemisphere 13.7
1933 Female, age 85, both hemispheres 13.3
2245 Female, age 91, both hemispheres 13.0
1990 Female, age 91, right hemisphere 12.7
2250 Female, age 67, right hemisphere 10.2
2692 Male, age 74, both hemispheres 8.1
2018 Male, age 76, both hemispheres 7.4
2693 Female, age 94, both hemispheres 7.0
2622 Female, age 67, right hemisphere 6.0
Perirhinal gyrus
nTPM: 13.8
1847 Female, age 91, left hemisphere 17.9
1841 Female, age 85, right hemisphere 14.6
2521 Female, age 94, right hemisphere 14.4
1794 Male, age 80, right hemisphere 14.0
2848 Male, age 76, right hemisphere 8.1
Subiculum
nTPM: 12.0
2619 Male, age 74, both hemispheres 21.1
2729 Female, age 91, right hemisphere 15.8
1901 Male, age 80, both hemispheres 10.9
1977 Female, age 85, both hemispheres 9.4
2438 Female, age 94, left hemisphere 9.3
2042 Male, age 76, both hemispheres 5.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 115.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 115.5
Samples: 197

Max nTPM: 244.7
Min nTPM: 71.6
Std nTPM: 23.8
Median nTPM: 112.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 244.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 196.9
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 195.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 182.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 176.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 171.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 169.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 163.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 163.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 160.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 155.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 404.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 404.3
FF:10153-102I9 76 years, female 418.4
FF:10169-103B7 60 years, female 390.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 166.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 166.7
Samples: 4

Max nTPM: 199.2
Min nTPM: 125.7
Sample A Female 199.2
Sample B Female 163.4
Sample C Male 178.5
Sample D Male 125.7
Entorhinal cortex
nTPM: 135.3
Samples: 4

Max nTPM: 147.1
Min nTPM: 110.0
Sample A Female 147.1
Sample B Female 145.5
Sample C Male 138.5
Sample D Male 110.0
Subiculum
nTPM: 152.4
Samples: 4

Max nTPM: 176.3
Min nTPM: 140.8
Sample A Female 176.3
Sample B Female 145.5
Sample C Male 140.8
Sample D Male 147.0
Ventral hippocampus
nTPM: 154.7
Samples: 4

Max nTPM: 174.8
Min nTPM: 124.2
Sample A Female 174.8
Sample B Female 124.2
Sample C Male 173.5
Sample D Male 146.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 199.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 199.1
Samples: 4

Max nTPM: 222.0
Min nTPM: 182.0
Sample A Male 192.6
Sample B Male 182.0
Sample C Female 199.6
Sample D Female 222.0
Hippocampal formation
nTPM: 188.8
Samples: 4

Max nTPM: 198.6
Min nTPM: 182.1
Sample A Male 187.0
Sample B Male 187.6
Sample C Female 198.6
Sample D Female 182.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.8
69080016 Antisense, RP_050324_01_D06, Mouse strain C57BL/6J (56 days, male) 22.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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