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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA053361
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Low
Inner nuclear layer
Not detected
Inner plexiform layer
Low
Ganglion cells
Not detected
Nerve fiber layer
Low
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 35.4
Min nTPM: 2.9
Std nTPM: 6.9
Median nTPM: 0.0
172_1
72 years, female
35.4
503_1
68 years, male
34.4
177_1
74 years, male
32.1
115_1
83 years, male
31.7
356_1
87 years, female
31.5
352_1
62 years, male
31.3
379_1
60 years, male
30.6
163_1
78 years, male
29.4
447_1
81 years, male
29.2
243_1
75 years, male
28.6
355_1
70 years, female
28.5
354_1
81 years, female
28.3
351_1
91 years, male
28.2
386_1
76 years, male
27.7
394_1
75 years, female
27.4
350_1
84 years, female
27.0
375_1
74 years, female
26.9
264_1
73 years, female
26.7
349_1
83 years, male
26.6
384_1
83 years, male
26.0
246_1
77 years, male
25.9
317_1
60 years, male
25.8
425_1
59 years, female
25.7
389_1
86 years, female
25.6
517_1
88 years, male
25.0
292_1
71 years, male
24.5
189_1
76 years, male
23.9
376_1
75 years, female
23.5
468_1
89 years, male
23.5
286_1
68 years, female
23.1
377_1
82 years, female
23.1
9_1
66 years, female
22.4
173_1
67 years, male
22.3
452_1
88 years, female
22.1
265_1
87 years, male
21.7
99_1
64 years, male
21.3
254_1
77 years, female
21.2
414_1
84 years, female
21.2
335_1
73 years, female
21.1
109_1
81 years, female
20.6
319_1
81 years, male
20.6
506_1
65 years, male
20.6
229_1
69 years, female
20.5
126_1
63 years, male
20.2
266_1
85 years, male
19.8
42_1
85 years, male
19.4
237_1
82 years, male
19.3
396_1
62 years, male
19.3
291_1
76 years, male
18.8
353_1
82 years, female
18.8
406_1
79 years, male
18.7
251_1
78 years, male
18.5
347_1
72 years, male
18.5
120_1
70 years, female
17.7
18_1
88 years, male
17.6
318_1
68 years, male
17.6
526_1
61 years, male
17.6
35_1
74 years, female
17.5
6_1
73 years, female
17.4
153_1
70 years, female
17.2
4_1
88 years, female
16.9
404_1
82 years, female
16.8
217_1
76 years, male
16.4
324_1
76 years, male
16.2
405_1
91 years, male
16.2
348_1
84 years, male
15.9
314_1
67 years, male
15.3
293_1
68 years, female
15.2
32_1
67 years, male
14.9
218_1
71 years, female
14.7
313_1
79 years, female
14.6
117_1
61 years, male
14.5
119_1
70 years, female
14.4
288_1
66 years, female
14.4
315_1
62 years, female
14.2
518_1
75 years, female
13.9
162_1
79 years, female
13.6
321_1
62 years, female
13.6
311_1
78 years, male
13.3
320_1
89 years, female
13.1
480_1
63 years, male
13.1
142_1
61 years, female
12.9
137_1
83 years, male
12.7
499_1
55 years, female
12.6
81_1
67 years, male
12.4
89_1
63 years, male
12.4
295_1
61 years, female
12.4
415_1
77 years, female
12.4
17_1
71 years, male
12.1
149_1
88 years, male
11.9
41_1
94 years, female
11.7
466_1
57 years, female
11.6
43_1
64 years, female
11.2
2_1
77 years, female
11.1
316_1
62 years, male
11.0
307_1
66 years, female
9.9
139_1
64 years, female
9.7
491_1
89 years, female
9.5
322_1
76 years, male
9.2
501_1
88 years, male
9.1
490_1
67 years, female
8.9
413_1
59 years, female
8.7
145_1
84 years, male
7.6
308_1
70 years, female
3.5
495_1
57 years, female
2.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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