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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:20.7 nTPM
HPA:20.7 nTPM
GTEx:18.4 nTPM
FANTOM5:17.1 Scaled Tags Per Million
Pig:19.6 nTPM
Mouse:51.8 nTPM
Allen mouse:5.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010136Antibody CAB004372
Glial cells LowMedium
Neuronal cells LowMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.7
Sample id Sample description nTPM
Hippocampus
nTPM: 18.0
2148 Female, age 91, left hemisphere 21.8
2621 Female, age 67, right hemisphere 20.7
1855 Male, age 76, left hemisphere 17.3
1911 Female, age 85, right hemisphere 17.3
1898 Male, age 80, left hemisphere 16.3
2529 Female, age 94, left hemisphere 14.7
Dentate gyrus
nTPM: 19.7
2531 Female, age 67, both hemispheres 26.3
2246 Female, age 85, both hemispheres 21.5
1927 Female, age 91, both hemispheres 19.2
2528 Male, age 74, both hemispheres 17.8
2010 Male, age 76, both hemispheres 16.9
2530 Female, age 94, left hemisphere 16.6
Entorhinal gyrus
nTPM: 14.8
1787 Male, age 76, left hemisphere 16.6
1938 Female, age 85, left hemisphere 15.2
2613 Female, age 94, left hemisphere 15.1
2764 Male, age 80, right hemisphere 14.5
2117 Female, age 91, right hemisphere 14.1
2686 Male, age 75, right hemisphere 13.7
Hippocampus, CA1
nTPM: 20.3
2749 Male, age 80, left hemisphere 21.8
2527 Male, age 74, both hemispheres 20.7
1873 Female, age 85, both hemispheres 20.3
2082 Female, age 91, right hemisphere 19.5
2045 Male, age 76, both hemispheres 19.4
Hippocampus, CA2
nTPM: 16.1
2113 Female, age 91, right hemisphere 19.2
1940 Female, age 85, left hemisphere 18.0
2437 Female, age 94, left hemisphere 16.3
1963 Male, age 80, left hemisphere 16.1
2249 Male, age 74, both hemispheres 15.1
1892 Male, age 76, both hemispheres 11.7
Hippocampus, CA3
nTPM: 20.7
2620 Female, age 94, left hemisphere 35.4
2861 Female, age 67, both hemispheres 25.1
2137 Male, age 80, left hemisphere 19.8
2436 Male, age 74, both hemispheres 16.5
1891 Female, age 85, both hemispheres 16.3
1867 Male, age 76, both hemispheres 11.3
Parahippocampal cortex
nTPM: 15.6
2622 Female, age 67, right hemisphere 21.0
2250 Female, age 67, right hemisphere 17.0
2245 Female, age 91, both hemispheres 16.8
1933 Female, age 85, both hemispheres 16.5
2692 Male, age 74, both hemispheres 15.6
2018 Male, age 76, both hemispheres 15.0
2532 Female, age 72, left hemisphere 14.4
1990 Female, age 91, right hemisphere 13.7
1850 Male, age 80, both hemispheres 13.3
2693 Female, age 94, both hemispheres 12.6
Perirhinal gyrus
nTPM: 15.7
1794 Male, age 80, right hemisphere 16.6
1847 Female, age 91, left hemisphere 16.0
1841 Female, age 85, right hemisphere 15.9
2848 Male, age 76, right hemisphere 15.1
2521 Female, age 94, right hemisphere 14.7
Subiculum
nTPM: 15.9
2438 Female, age 94, left hemisphere 18.7
2729 Female, age 91, right hemisphere 17.2
2619 Male, age 74, both hemispheres 16.1
1977 Female, age 85, both hemispheres 15.6
1901 Male, age 80, both hemispheres 15.1
2042 Male, age 76, both hemispheres 12.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.4
Samples: 197

Max nTPM: 39.1
Min nTPM: 6.9
Std nTPM: 6.0
Median nTPM: 17.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 39.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 36.0
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 35.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 35.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 34.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 34.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 32.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 31.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 30.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 30.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 30.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.1
FF:10169-103B7 60 years, female 18.8
FF:10153-102I9 76 years, female 15.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.5
Samples: 4

Max nTPM: 22.3
Min nTPM: 15.6
Sample A Female 22.3
Sample B Female 19.6
Sample C Male 16.3
Sample D Male 15.6
Entorhinal cortex
nTPM: 13.6
Samples: 4

Max nTPM: 15.4
Min nTPM: 11.8
Sample A Female 15.4
Sample B Female 13.4
Sample C Male 13.9
Sample D Male 11.8
Subiculum
nTPM: 16.6
Samples: 4

Max nTPM: 19.6
Min nTPM: 14.5
Sample A Female 19.6
Sample B Female 15.1
Sample C Male 17.0
Sample D Male 14.5
Ventral hippocampus
nTPM: 19.6
Samples: 4

Max nTPM: 26.9
Min nTPM: 14.2
Sample A Female 18.3
Sample B Female 14.2
Sample C Male 26.9
Sample D Male 18.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 51.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.5
Samples: 4

Max nTPM: 47.8
Min nTPM: 40.7
Sample A Male 45.7
Sample B Male 40.7
Sample C Female 47.8
Sample D Female 47.8
Hippocampal formation
nTPM: 51.8
Samples: 4

Max nTPM: 56.7
Min nTPM: 41.9
Sample A Male 41.9
Sample B Male 53.4
Sample C Female 55.0
Sample D Female 56.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.7
69549250 Antisense, RP_050125_02_C01, Mouse strain C57BL/6J (56 days, male) 5.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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