ABOUTMENU
HELP
NEWS
SGCE
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:19.6 nTPM
HPA:19.6 nTPM
GTEx:30.7 nTPM
FANTOM5:26.0 Scaled Tags Per Million
Pig:23.0 nTPM
Mouse:30.9 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.6
Sample id Sample description nTPM
Hippocampus
nTPM: 19.4
2529 Female, age 94, left hemisphere 20.3
1898 Male, age 80, left hemisphere 19.8
1855 Male, age 76, left hemisphere 19.7
1911 Female, age 85, right hemisphere 19.7
2148 Female, age 91, left hemisphere 19.1
2621 Female, age 67, right hemisphere 18.0
Dentate gyrus
nTPM: 19.3
2528 Male, age 74, both hemispheres 21.9
2010 Male, age 76, both hemispheres 19.9
1927 Female, age 91, both hemispheres 19.3
2246 Female, age 85, both hemispheres 18.9
2531 Female, age 67, both hemispheres 18.1
2530 Female, age 94, left hemisphere 18.0
Entorhinal gyrus
nTPM: 19.2
1938 Female, age 85, left hemisphere 20.3
1787 Male, age 76, left hemisphere 20.0
2117 Female, age 91, right hemisphere 19.7
2764 Male, age 80, right hemisphere 18.8
2686 Male, age 75, right hemisphere 18.2
2613 Female, age 94, left hemisphere 18.0
Hippocampus, CA1
nTPM: 19.4
1873 Female, age 85, both hemispheres 20.5
2045 Male, age 76, both hemispheres 20.4
2082 Female, age 91, right hemisphere 18.9
2527 Male, age 74, both hemispheres 18.9
2749 Male, age 80, left hemisphere 18.6
Hippocampus, CA2
nTPM: 19.3
1892 Male, age 76, both hemispheres 20.8
2437 Female, age 94, left hemisphere 19.7
2249 Male, age 74, both hemispheres 19.6
2113 Female, age 91, right hemisphere 18.6
1940 Female, age 85, left hemisphere 18.5
1963 Male, age 80, left hemisphere 18.5
Hippocampus, CA3
nTPM: 19.6
1891 Female, age 85, both hemispheres 20.9
2436 Male, age 74, both hemispheres 20.7
1867 Male, age 76, both hemispheres 19.8
2620 Female, age 94, left hemisphere 19.7
2137 Male, age 80, left hemisphere 18.6
2861 Female, age 67, both hemispheres 17.8
Parahippocampal cortex
nTPM: 19.3
2018 Male, age 76, both hemispheres 20.5
1933 Female, age 85, both hemispheres 20.1
2692 Male, age 74, both hemispheres 19.8
2250 Female, age 67, right hemisphere 19.7
1850 Male, age 80, both hemispheres 19.5
2693 Female, age 94, both hemispheres 19.3
1990 Female, age 91, right hemisphere 18.9
2532 Female, age 72, left hemisphere 18.5
2245 Female, age 91, both hemispheres 18.3
2622 Female, age 67, right hemisphere 18.0
Perirhinal gyrus
nTPM: 19.5
1841 Female, age 85, right hemisphere 20.3
1847 Female, age 91, left hemisphere 19.8
2848 Male, age 76, right hemisphere 19.5
1794 Male, age 80, right hemisphere 19.1
2521 Female, age 94, right hemisphere 18.9
Subiculum
nTPM: 19.4
2042 Male, age 76, both hemispheres 20.4
2729 Female, age 91, right hemisphere 19.6
1977 Female, age 85, both hemispheres 19.5
2619 Male, age 74, both hemispheres 19.3
1901 Male, age 80, both hemispheres 19.1
2438 Female, age 94, left hemisphere 18.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.7
Samples: 197

Max nTPM: 63.4
Min nTPM: 17.2
Std nTPM: 6.3
Median nTPM: 29.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 63.4
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 44.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 42.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 42.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 42.8
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 42.7
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 42.7
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 42.1
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 41.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 41.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 41.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.0
FF:10153-102I9 76 years, female 35.3
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.1
Samples: 4

Max nTPM: 27.7
Min nTPM: 19.7
Sample A Female 27.7
Sample B Female 20.9
Sample C Male 23.9
Sample D Male 19.7
Entorhinal cortex
nTPM: 18.3
Samples: 4

Max nTPM: 21.0
Min nTPM: 14.9
Sample A Female 19.4
Sample B Female 21.0
Sample C Male 17.9
Sample D Male 14.9
Subiculum
nTPM: 18.8
Samples: 4

Max nTPM: 21.2
Min nTPM: 17.3
Sample A Female 19.0
Sample B Female 17.6
Sample C Male 17.3
Sample D Male 21.2
Ventral hippocampus
nTPM: 20.2
Samples: 4

Max nTPM: 23.4
Min nTPM: 17.9
Sample A Female 23.4
Sample B Female 17.9
Sample C Male 20.0
Sample D Male 19.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.6
Samples: 4

Max nTPM: 29.5
Min nTPM: 21.1
Sample A Male 27.9
Sample B Male 27.7
Sample C Female 29.5
Sample D Female 21.1
Hippocampal formation
nTPM: 30.9
Samples: 4

Max nTPM: 31.6
Min nTPM: 30.2
Sample A Male 31.6
Sample B Male 31.0
Sample C Female 30.2
Sample D Female 30.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
68301168 Antisense, RP_041129_02_G02, Mouse strain C57BL/6J (56 days, male) 1.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.