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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:20.3 nTPM
HPA:20.3 nTPM
GTEx:21.4 nTPM
FANTOM5:46.0 Scaled Tags Per Million
Pig:13.8 nTPM
Mouse:105.1 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035895
Glial cells High
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.3
Sample id Sample description nTPM
Hippocampus
nTPM: 18.5
1898 Male, age 80, left hemisphere 19.9
2148 Female, age 91, left hemisphere 19.1
2529 Female, age 94, left hemisphere 19.1
1911 Female, age 85, right hemisphere 18.6
1855 Male, age 76, left hemisphere 17.2
2621 Female, age 67, right hemisphere 17.2
Dentate gyrus
nTPM: 18.2
2528 Male, age 74, both hemispheres 24.1
2246 Female, age 85, both hemispheres 18.8
2010 Male, age 76, both hemispheres 18.0
1927 Female, age 91, both hemispheres 17.1
2530 Female, age 94, left hemisphere 15.9
2531 Female, age 67, both hemispheres 15.4
Entorhinal gyrus
nTPM: 19.3
2117 Female, age 91, right hemisphere 22.4
1938 Female, age 85, left hemisphere 21.3
2764 Male, age 80, right hemisphere 19.2
1787 Male, age 76, left hemisphere 19.1
2613 Female, age 94, left hemisphere 17.2
2686 Male, age 75, right hemisphere 16.4
Hippocampus, CA1
nTPM: 18.7
2527 Male, age 74, both hemispheres 21.8
2082 Female, age 91, right hemisphere 19.0
1873 Female, age 85, both hemispheres 18.9
2045 Male, age 76, both hemispheres 17.7
2749 Male, age 80, left hemisphere 16.3
Hippocampus, CA2
nTPM: 18.5
2249 Male, age 74, both hemispheres 23.0
2113 Female, age 91, right hemisphere 19.4
1940 Female, age 85, left hemisphere 18.2
1892 Male, age 76, both hemispheres 17.4
1963 Male, age 80, left hemisphere 16.6
2437 Female, age 94, left hemisphere 16.5
Hippocampus, CA3
nTPM: 18.4
2436 Male, age 74, both hemispheres 23.1
1891 Female, age 85, both hemispheres 20.2
2620 Female, age 94, left hemisphere 17.9
1867 Male, age 76, both hemispheres 17.7
2137 Male, age 80, left hemisphere 17.1
2861 Female, age 67, both hemispheres 14.6
Parahippocampal cortex
nTPM: 20.0
2250 Female, age 67, right hemisphere 22.6
1850 Male, age 80, both hemispheres 21.5
2692 Male, age 74, both hemispheres 21.2
2018 Male, age 76, both hemispheres 20.1
1933 Female, age 85, both hemispheres 19.8
1990 Female, age 91, right hemisphere 19.7
2245 Female, age 91, both hemispheres 19.1
2622 Female, age 67, right hemisphere 18.8
2693 Female, age 94, both hemispheres 18.8
2532 Female, age 72, left hemisphere 18.4
Perirhinal gyrus
nTPM: 20.3
1847 Female, age 91, left hemisphere 21.5
1794 Male, age 80, right hemisphere 20.6
1841 Female, age 85, right hemisphere 20.5
2521 Female, age 94, right hemisphere 19.5
2848 Male, age 76, right hemisphere 19.4
Subiculum
nTPM: 19.3
2619 Male, age 74, both hemispheres 21.0
2729 Female, age 91, right hemisphere 20.9
1977 Female, age 85, both hemispheres 19.8
2438 Female, age 94, left hemisphere 19.1
1901 Male, age 80, both hemispheres 18.4
2042 Male, age 76, both hemispheres 16.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.4
Samples: 197

Max nTPM: 36.1
Min nTPM: 11.9
Std nTPM: 4.6
Median nTPM: 21.0
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 36.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 35.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 35.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 32.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 32.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 31.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 30.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 30.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 29.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 29.8
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 29.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.0
FF:10153-102I9 76 years, female 47.1
FF:10169-103B7 60 years, female 44.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.1
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.6
Sample A Female 12.3
Sample B Female 10.8
Sample C Male 11.8
Sample D Male 9.6
Entorhinal cortex
nTPM: 9.7
Samples: 4

Max nTPM: 10.8
Min nTPM: 8.3
Sample A Female 8.8
Sample B Female 10.7
Sample C Male 10.8
Sample D Male 8.3
Subiculum
nTPM: 13.8
Samples: 4

Max nTPM: 14.6
Min nTPM: 12.6
Sample A Female 13.5
Sample B Female 14.6
Sample C Male 12.6
Sample D Male 14.6
Ventral hippocampus
nTPM: 11.7
Samples: 4

Max nTPM: 12.3
Min nTPM: 10.8
Sample A Female 11.5
Sample B Female 12.3
Sample C Male 12.0
Sample D Male 10.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 105.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 101.4
Samples: 4

Max nTPM: 107.8
Min nTPM: 93.4
Sample A Male 105.8
Sample B Male 107.8
Sample C Female 98.7
Sample D Female 93.4
Hippocampal formation
nTPM: 105.1
Samples: 4

Max nTPM: 116.0
Min nTPM: 96.6
Sample A Male 116.0
Sample B Male 96.6
Sample C Female 98.6
Sample D Female 109.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
68637611 Antisense, RP_050126_01_C02, Mouse strain C57BL/6J (56 days, male) 1.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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