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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:386.6 nTPM
HPA:386.6 nTPM
GTEx:362.0 nTPM
FANTOM5:885.5 Scaled Tags Per Million
Pig:628.6 nTPM
Mouse:1438.9 nTPM
Allen mouse:15.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB025918
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 386.6
Sample id Sample description nTPM
Hippocampus
nTPM: 191.0
1898 Male, age 80, left hemisphere 347.5
2621 Female, age 67, right hemisphere 245.8
1855 Male, age 76, left hemisphere 225.0
2148 Female, age 91, left hemisphere 176.0
1911 Female, age 85, right hemisphere 82.1
2529 Female, age 94, left hemisphere 69.3
Dentate gyrus
nTPM: 248.4
1927 Female, age 91, both hemispheres 318.2
2530 Female, age 94, left hemisphere 294.3
2010 Male, age 76, both hemispheres 270.3
2246 Female, age 85, both hemispheres 244.1
2531 Female, age 67, both hemispheres 194.0
2528 Male, age 74, both hemispheres 169.7
Entorhinal gyrus
nTPM: 184.7
2764 Male, age 80, right hemisphere 244.2
2613 Female, age 94, left hemisphere 239.3
1938 Female, age 85, left hemisphere 224.0
1787 Male, age 76, left hemisphere 219.1
2686 Male, age 75, right hemisphere 111.8
2117 Female, age 91, right hemisphere 70.2
Hippocampus, CA1
nTPM: 253.9
2749 Male, age 80, left hemisphere 419.0
1873 Female, age 85, both hemispheres 304.1
2082 Female, age 91, right hemisphere 186.5
2045 Male, age 76, both hemispheres 186.1
2527 Male, age 74, both hemispheres 173.6
Hippocampus, CA2
nTPM: 216.6
1963 Male, age 80, left hemisphere 360.8
1892 Male, age 76, both hemispheres 279.1
1940 Female, age 85, left hemisphere 212.6
2437 Female, age 94, left hemisphere 164.1
2113 Female, age 91, right hemisphere 150.6
2249 Male, age 74, both hemispheres 132.2
Hippocampus, CA3
nTPM: 168.8
2137 Male, age 80, left hemisphere 224.5
2861 Female, age 67, both hemispheres 208.6
2620 Female, age 94, left hemisphere 205.5
2436 Male, age 74, both hemispheres 131.8
1867 Male, age 76, both hemispheres 129.3
1891 Female, age 85, both hemispheres 113.3
Parahippocampal cortex
nTPM: 218.9
1850 Male, age 80, both hemispheres 331.9
2250 Female, age 67, right hemisphere 267.6
2245 Female, age 91, both hemispheres 266.8
1933 Female, age 85, both hemispheres 262.2
2693 Female, age 94, both hemispheres 230.2
1990 Female, age 91, right hemisphere 211.2
2532 Female, age 72, left hemisphere 204.7
2622 Female, age 67, right hemisphere 170.1
2018 Male, age 76, both hemispheres 159.3
2692 Male, age 74, both hemispheres 84.7
Perirhinal gyrus
nTPM: 386.6
2521 Female, age 94, right hemisphere 481.1
1847 Female, age 91, left hemisphere 470.5
1794 Male, age 80, right hemisphere 422.6
1841 Female, age 85, right hemisphere 326.0
2848 Male, age 76, right hemisphere 232.9
Subiculum
nTPM: 122.2
1977 Female, age 85, both hemispheres 207.8
1901 Male, age 80, both hemispheres 137.0
2729 Female, age 91, right hemisphere 116.4
2438 Female, age 94, left hemisphere 100.5
2619 Male, age 74, both hemispheres 95.9
2042 Male, age 76, both hemispheres 75.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 362.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 362.0
Samples: 197

Max nTPM: 1750.0
Min nTPM: 49.1
Std nTPM: 293.7
Median nTPM: 260.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 1750.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 1253.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 1227.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 1226.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 1174.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 1056.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 1007.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 1005.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 993.6
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 968.8
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 956.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 885.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 885.5
FF:10169-103B7 60 years, female 1345.6
FF:10153-102I9 76 years, female 425.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 628.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 628.5
Samples: 4

Max nTPM: 810.3
Min nTPM: 430.0
Sample A Female 810.3
Sample B Female 706.2
Sample C Male 430.0
Sample D Male 567.6
Entorhinal cortex
nTPM: 575.9
Samples: 4

Max nTPM: 655.4
Min nTPM: 497.8
Sample A Female 655.4
Sample B Female 623.1
Sample C Male 527.4
Sample D Male 497.8
Subiculum
nTPM: 526.0
Samples: 4

Max nTPM: 735.7
Min nTPM: 445.0
Sample A Female 735.7
Sample B Female 461.0
Sample C Male 462.1
Sample D Male 445.0
Ventral hippocampus
nTPM: 520.4
Samples: 4

Max nTPM: 621.0
Min nTPM: 374.4
Sample A Female 546.9
Sample B Female 374.4
Sample C Male 539.3
Sample D Male 621.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1438.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1178.0
Samples: 4

Max nTPM: 1241.2
Min nTPM: 1104.5
Sample A Male 1104.5
Sample B Male 1241.2
Sample C Female 1169.8
Sample D Female 1196.4
Hippocampal formation
nTPM: 1438.9
Samples: 4

Max nTPM: 1593.0
Min nTPM: 1267.1
Sample A Male 1467.7
Sample B Male 1427.6
Sample C Female 1593.0
Sample D Female 1267.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.0
1127 Antisense, RP_Baylor_103128, Mouse strain C57BL/6J (56 days, male) 15.0
1128 Antisense, RP_Baylor_103128, Mouse strain C57BL/6J (56 days, male) 14.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.