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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		22.044
RNA expressioni
Consensus:12.3 nTPM
HPA:12.3 nTPM
GTEx:7.0 nTPM
FANTOM5:3.0 Scaled Tags Per Million
Pig:0.7 nTPM
Mouse:42.2 nTPM
Allen mouse:2.7 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA065566
Amygdala mean intensity 22.044
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 18.363
Basal medial amygdaloid nucleus 16.529
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 16.110
Cortical amygdala 22.044
Central amygdala 12.956
Medial amygdaloid nucleus 13.248

AMYGDALA - HPA Brain RNA-seq
Max nTPM 12.3
Sample id Sample description nTPM
Amygdala
nTPM: 9.6
2695 Female, age 67, right hemisphere 11.3
2814 Male, age 76, right hemisphere 9.7
2517 Female, age 94, left hemisphere 9.3
2514 Male, age 75, right hemisphere 9.0
1987 Female, age 91, left hemisphere 8.8
Basal amygdala
nTPM: 11.0
2827 Female, age 67, right hemisphere 16.0
2685 Female, age 94, left hemisphere 11.3
1955 Male, age 76, both hemispheres 10.3
2609 Male, age 75, right hemisphere 9.7
2110 Male, age 80, left hemisphere 9.6
2243 Female, age 91, right hemisphere 9.0
Central amygdala
nTPM: 10.4
2826 Female, age 94, left hemisphere 13.3
1905 Male, age 76, both hemispheres 10.2
2515 Male, age 75, right hemisphere 9.9
2701 Female, age 91, right hemisphere 9.4
2239 Male, age 80, left hemisphere 9.3
Corticomedial amygdala
nTPM: 9.8
2535 Female, age 67, right hemisphere 12.8
2428 Male, age 75, right hemisphere 9.9
2240 Male, age 76, both hemispheres 9.4
2429 Female, age 94, left hemisphere 9.1
2242 Female, age 91, right hemisphere 9.0
2829 Male, age 80, left hemisphere 8.8
Lateral amygdala
nTPM: 12.3
2830 Female, age 67, right hemisphere 20.2
2534 Female, age 94, left hemisphere 12.9
2256 Male, age 80, left hemisphere 11.2
2516 Male, age 75, right hemisphere 10.4
2255 Female, age 91, right hemisphere 10.3
1883 Male, age 76, both hemispheres 8.8
Stria terminalis, bed nucleus
nTPM: 10.6
2486 Female, age 94, both hemispheres 14.2
1974 Female, age 91, both hemispheres 9.2
2201 Male, age 74, unknown 8.5

AMYGDALA - GTEx RNA-seqi
Average nTPM 7.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 7.0
Samples: 152

Max nTPM: 31.6
Min nTPM: 1.0
Std nTPM: 5.1
Median nTPM: 5.4
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 31.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 27.3
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 26.3
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 23.8
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 20.1
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 19.3
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 19.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 18.0
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 16.8
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 16.5
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 15.6
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 3.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 3.0
FF:10151-102I7 76 years, female 3.0

AMYGDALA - Pig RNA-seqi
Average nTPM 0.7
Pig sample Sample description nTPM
Amygdala
nTPM: 0.7
Samples: 4

Max nTPM: 1.4
Min nTPM: 0.3
Sample A Female 0.5
Sample B Female 1.4
Sample C Male 0.3
Sample D Male 0.4

AMYGDALA - Mouse RNA-seqi
Average nTPM 42.2
Mouse sample Sample description nTPM
Amygdala
nTPM: 42.2
Samples: 4

Max nTPM: 61.6
Min nTPM: 27.5
Sample A Male 27.5
Sample B Male 45.8
Sample C Female 61.6
Sample D Female 33.8

AMYGDALA - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 2.7
72109410 Antisense, RP_050712_03_E04, Mouse strain C57BL/6J (56 days, male) 4.9
70813257 Antisense, RP_050712_03_E04, Mouse strain C57BL/6J (56 days, male) 1.4
69855739 Antisense, RP_050331_01_B06, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.