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RNF112
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:14.2 nTPM
HPA:14.2 nTPM
GTEx:8.8 nTPM
FANTOM5:3.5 Scaled Tags Per Million
Pig:2.9 nTPM
Mouse:39.0 nTPM
Allen mouse:19.5 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 14.2
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 12.9
2219 Male, age 76, both hemispheres 17.8
2586 Male, age 75, left hemisphere 14.3
1827 Male, age 72, unknown 14.1
2828 Female, age 72, unknown 13.0
2666 Male, age 74, left hemisphere 12.7
2019 Male, age 18, unknown 12.6
2411 Female, age 72, unknown 12.1
1870 Female, age 42, unknown 11.1
1833 Male, age 53, unknown 10.9
1830 Male, age 51, unknown 10.0
Dorsal raphe nucleus
nTPM: 11.7
2047 Male, age 72, unknown 12.8
2298 Female, age 72, unknown 12.5
2750 Male, age 76, both hemispheres 12.0
1828 Male, age 53, unknown 11.5
2016 Female, age 72, unknown 9.7
Inferior colliculus
nTPM: 11.5
1890 Male, age 53, unknown 11.7
2849 Male, age 72, unknown 11.7
2097 Female, age 72, unknown 11.6
1848 Female, age 42, unknown 10.8
Median raphe nucleus
nTPM: 14.2
2220 Male, age 76, midline 14.2
Pedunculopontine tegmental nucleus
nTPM: 11.8
1921 Female, age 85, both hemispheres 13.9
2334 Male, age 80, both hemispheres 11.6
2338 Male, age 61, both hemispheres 9.8
Periaquaductal grey, anterior
nTPM: 12.9
1795 Male, age 51, unknown 14.8
2502 Female, age 75, unknown 12.5
1947 Male, age 18, unknown 11.4
Periaquaductal grey, dorsal
nTPM: 12.4
1831 Male, age 72, unknown 13.5
1840 Male, age 53, unknown 12.6
2464 Female, age 72, unknown 12.0
2850 Male, age 76, both hemispheres 11.6
Periaquaductal grey, lateral
nTPM: 11.4
2140 Male, age 76, both hemispheres 11.9
2053 Male, age 18, unknown 11.7
2272 Male, age 74, both hemispheres 10.7
Pretectal area
nTPM: 13.9
1944 Female, age 72, unknown 17.8
1816 Male, age 51, unknown 17.2
1815 Male, age 53, unknown 15.9
2007 Male, age 72, unknown 15.2
2407 Male, age 75, both hemispheres 14.1
1817 Female, age 42, unknown 13.8
2224 Female, age 72, unknown 13.6
2667 Female, age 75, unknown 12.2
2825 Male, age 18, unknown 12.2
2316 Male, age 76, right hemisphere 11.5
2273 Male, age 74, both hemispheres 9.7
Red nucleus
nTPM: 10.3
2785 Male, age 18, unknown 12.7
2584 Male, age 75, left hemisphere 12.5
2588 Male, age 74, left hemisphere 12.3
2725 Female, age 75, unknown 11.1
2823 Male, age 76, right hemisphere 9.9
1904 Male, age 53, unknown 9.6
2769 Male, age 72, unknown 9.6
2503 Female, age 72, unknown 9.5
1954 Female, age 42, unknown 9.2
2227 Male, age 72, unknown 9.1
1865 Male, age 51, unknown 9.0
1821 Female, age 72, unknown 8.6
Substantia nigra
nTPM: 11.2
1889 Female, age 72, unknown 13.2
1851 Male, age 51, unknown 12.0
2665 Male, age 74, both hemispheres 12.0
1916 Female, age 42, unknown 11.5
2583 Male, age 75, right hemisphere 11.2
2590 Female, age 75, unknown 11.1
2409 Female, age 72, unknown 10.8
2241 Male, age 72, unknown 10.1
1941 Male, age 53, unknown 9.8
2699 Male, age 18, unknown 9.8
Superior colliculus
nTPM: 12.9
1796 Male, age 53, unknown 15.3
2087 Female, age 72, unknown 14.9
2664 Male, age 75, both hemispheres 14.0
2261 Male, age 18, unknown 13.9
2668 Female, age 75, unknown 12.9
1895 Male, age 76, right hemisphere 12.0
1913 Female, age 42, unknown 12.0
1839 Male, age 51, unknown 11.9
1995 Male, age 72, unknown 11.3
2587 Male, age 74, left hemisphere 10.5
Ventral tegmental area
nTPM: 11.7
2218 Male, age 76, both hemispheres 12.9
1942 Male, age 51, unknown 12.0
2021 Male, age 53, unknown 11.9
2410 Female, age 72, unknown 11.5
1915 Female, age 42, unknown 11.2
2223 Female, age 72, unknown 10.8

MIDBRAIN - GTEx RNA-seqi
Average nTPM 8.8
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 8.8
Samples: 139

Max nTPM: 19.4
Min nTPM: 1.9
Std nTPM: 3.1
Median nTPM: 8.4
GTEX-1HT8W-0011-R2a-SM-CMKH9 30-39 years, male 19.4
GTEX-17EVP-0011-R2a-SM-7LG4W 40-49 years, male 16.2
GTEX-147GR-0011-R2b-SM-5S2RQ 60-69 years, male 15.4
GTEX-15DYW-0011-R2b-SM-7KUKY 60-69 years, female 15.1
GTEX-13O3O-0011-R2b-SM-5P9H1 60-69 years, female 14.8
GTEX-13FXS-0011-R2b-SM-5K7XX 50-59 years, male 14.5
GTEX-16Z82-0011-R2b-SM-79OK9 60-69 years, male 14.4
GTEX-13OW6-0011-R2a-SM-5L3HG 50-59 years, male 13.8
GTEX-11GSO-0011-R2a-SM-57WDF 60-69 years, male 13.7
GTEX-13G51-0011-R2b-SM-5LZXS 60-69 years, male 13.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ 60-69 years, male 13.4
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 3.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 3.5
FF:10158-103A5 76 years, female 3.5

MIDBRAIN - Pig RNA-seqi
Average nTPM 2.9
Pig sample Sample description nTPM
Midbrain
nTPM: 2.9
Samples: 4

Max nTPM: 4.7
Min nTPM: 1.0
Sample A Female 1.0
Sample B Female 2.0
Sample C Male 4.7
Sample D Male 3.9
Periaqueductal gray
nTPM: 2.5
Samples: 3

Max nTPM: 3.5
Min nTPM: 1.8
Sample B Female 2.1
Sample C Male 3.5
Sample D Male 1.8
Substantia nigra
nTPM: 2.1
Samples: 4

Max nTPM: 3.2
Min nTPM: 0.5
Sample A Female 3.1
Sample B Female 1.4
Sample C Male 3.2
Sample D Male 0.5
Superior colliculi
nTPM: 2.8
Samples: 4

Max nTPM: 3.6
Min nTPM: 1.5
Sample A Female 3.4
Sample B Female 1.5
Sample C Male 3.6
Sample D Male 2.6

MIDBRAIN - Mouse RNA-seqi
Average nTPM 39.0
Mouse sample Sample description nTPM
Midbrain
nTPM: 39.1
Samples: 4

Max nTPM: 41.1
Min nTPM: 36.4
Sample A Male 41.1
Sample B Male 36.4
Sample C Female 37.6
Sample D Female 41.1

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 19.5
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 19.5
393241 Antisense, RP_040804_02_G10, Mouse strain C57BL/6J (56 days, male) 19.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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