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MRPS12
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:16.7 nTPM
HPA:16.7 nTPM
GTEx:24.8 nTPM
FANTOM5:26.6 Scaled Tags Per Million
Pig:18.6 nTPM
Mouse:27.0 nTPM

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 16.7
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 15.4
2019 Male, age 18, unknown 18.7
1827 Male, age 72, unknown 15.8
2411 Female, age 72, unknown 15.8
2586 Male, age 75, left hemisphere 15.7
2828 Female, age 72, unknown 15.3
2219 Male, age 76, both hemispheres 15.1
1833 Male, age 53, unknown 14.6
2666 Male, age 74, left hemisphere 14.5
1830 Male, age 51, unknown 14.2
1870 Female, age 42, unknown 14.1
Dorsal raphe nucleus
nTPM: 15.6
2298 Female, age 72, unknown 17.6
1828 Male, age 53, unknown 15.7
2750 Male, age 76, both hemispheres 15.2
2047 Male, age 72, unknown 15.1
2016 Female, age 72, unknown 14.2
Inferior colliculus
nTPM: 15.3
2097 Female, age 72, unknown 17.2
1848 Female, age 42, unknown 15.5
1890 Male, age 53, unknown 15.0
2849 Male, age 72, unknown 13.5
Median raphe nucleus
nTPM: 14.6
2220 Male, age 76, midline 14.6
Pedunculopontine tegmental nucleus
nTPM: 15.5
1921 Female, age 85, both hemispheres 15.9
2334 Male, age 80, both hemispheres 15.9
2338 Male, age 61, both hemispheres 14.6
Periaquaductal grey, anterior
nTPM: 16.0
1795 Male, age 51, unknown 16.9
1947 Male, age 18, unknown 15.8
2502 Female, age 75, unknown 15.3
Periaquaductal grey, dorsal
nTPM: 14.2
1831 Male, age 72, unknown 14.5
1840 Male, age 53, unknown 14.5
2464 Female, age 72, unknown 14.4
2850 Male, age 76, both hemispheres 13.5
Periaquaductal grey, lateral
nTPM: 14.9
2272 Male, age 74, both hemispheres 16.4
2053 Male, age 18, unknown 14.2
2140 Male, age 76, both hemispheres 14.1
Pretectal area
nTPM: 16.7
2007 Male, age 72, unknown 20.4
1816 Male, age 51, unknown 19.1
1817 Female, age 42, unknown 18.8
1944 Female, age 72, unknown 18.1
2273 Male, age 74, both hemispheres 16.8
2667 Female, age 75, unknown 16.4
1815 Male, age 53, unknown 16.2
2316 Male, age 76, right hemisphere 15.3
2224 Female, age 72, unknown 15.1
2407 Male, age 75, both hemispheres 13.9
2825 Male, age 18, unknown 13.8
Red nucleus
nTPM: 16.1
2785 Male, age 18, unknown 18.2
1821 Female, age 72, unknown 17.1
2725 Female, age 75, unknown 17.1
2503 Female, age 72, unknown 16.2
2769 Male, age 72, unknown 16.2
1954 Female, age 42, unknown 16.0
1904 Male, age 53, unknown 15.9
2823 Male, age 76, right hemisphere 15.9
2227 Male, age 72, unknown 15.5
2588 Male, age 74, left hemisphere 15.3
1865 Male, age 51, unknown 15.2
2584 Male, age 75, left hemisphere 14.2
Substantia nigra
nTPM: 16.4
1916 Female, age 42, unknown 19.2
1889 Female, age 72, unknown 17.0
1851 Male, age 51, unknown 16.9
1941 Male, age 53, unknown 16.5
2583 Male, age 75, right hemisphere 16.5
2590 Female, age 75, unknown 16.3
2409 Female, age 72, unknown 16.1
2241 Male, age 72, unknown 15.7
2665 Male, age 74, both hemispheres 14.9
2699 Male, age 18, unknown 14.8
Superior colliculus
nTPM: 15.8
2087 Female, age 72, unknown 18.0
1796 Male, age 53, unknown 17.5
2261 Male, age 18, unknown 16.3
1913 Female, age 42, unknown 15.6
2668 Female, age 75, unknown 15.5
1995 Male, age 72, unknown 15.3
1895 Male, age 76, right hemisphere 15.2
2587 Male, age 74, left hemisphere 15.1
1839 Male, age 51, unknown 14.6
2664 Male, age 75, both hemispheres 14.5
Ventral tegmental area
nTPM: 15.5
1915 Female, age 42, unknown 16.6
2218 Male, age 76, both hemispheres 16.2
2410 Female, age 72, unknown 15.9
1942 Male, age 51, unknown 15.3
2223 Female, age 72, unknown 14.6
2021 Male, age 53, unknown 14.5

MIDBRAIN - GTEx RNA-seqi
Average nTPM 24.8
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 24.8
Samples: 139

Max nTPM: 47.4
Min nTPM: 11.4
Std nTPM: 6.2
Median nTPM: 24.6
GTEX-14BIM-0011-R2b-SM-69LQ6 60-69 years, female 47.4
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 39.8
GTEX-1313W-0011-R2a-SM-5EGLF 50-59 years, female 39.3
GTEX-13O3Q-0011-R2b-SM-5KM3K 50-59 years, male 39.3
GTEX-12ZZX-0011-R2a-SM-5EGLG 40-49 years, female 35.8
GTEX-15ER7-0011-R2a-SM-6M46O 20-29 years, female 35.1
GTEX-1EMGI-0011-R2b-SM-9OSVS 60-69 years, male 34.8
GTEX-1B8L1-0011-R2a-SM-9OSVL 60-69 years, male 34.1
GTEX-1MA7X-0011-R2b-SM-EZ6MT 60-69 years, male 34.1
GTEX-1B933-0011-R2b-SM-7IGNM 50-59 years, female 33.3
GTEX-11GS4-0011-R2a-SM-DO942 60-69 years, male 33.2
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 26.6
FF:10158-103A5 76 years, female 26.6

MIDBRAIN - Pig RNA-seqi
Average nTPM 18.6
Pig sample Sample description nTPM
Midbrain
nTPM: 18.6
Samples: 4

Max nTPM: 21.3
Min nTPM: 15.5
Sample A Female 19.2
Sample B Female 15.5
Sample C Male 21.3
Sample D Male 18.4
Periaqueductal gray
nTPM: 13.9
Samples: 3

Max nTPM: 14.7
Min nTPM: 12.8
Sample B Female 14.3
Sample C Male 14.7
Sample D Male 12.8
Substantia nigra
nTPM: 16.5
Samples: 4

Max nTPM: 21.0
Min nTPM: 14.1
Sample A Female 21.0
Sample B Female 14.5
Sample C Male 16.4
Sample D Male 14.1
Superior colliculi
nTPM: 18.3
Samples: 4

Max nTPM: 21.6
Min nTPM: 14.6
Sample A Female 21.6
Sample B Female 14.6
Sample C Male 20.3
Sample D Male 16.8

MIDBRAIN - Mouse RNA-seqi
Average nTPM 27.0
Mouse sample Sample description nTPM
Midbrain
nTPM: 27.0
Samples: 4

Max nTPM: 34.5
Min nTPM: 21.2
Sample A Male 34.5
Sample B Male 21.2
Sample C Female 24.6
Sample D Female 27.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.