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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:474.3 nTPM
HPA:474.3 nTPM
GTEx:469.4 nTPM
FANTOM5:720.5 Scaled Tags Per Million
Pig:234.5 nTPM
Mouse:836.7 nTPM
Allen mouse:21.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003482
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 474.3
Sample id Sample description nTPM
Hippocampus
nTPM: 422.2
1898 Male, age 80, left hemisphere 488.5
2621 Female, age 67, right hemisphere 435.3
2148 Female, age 91, left hemisphere 432.2
1855 Male, age 76, left hemisphere 421.0
2529 Female, age 94, left hemisphere 381.6
1911 Female, age 85, right hemisphere 374.4
Dentate gyrus
nTPM: 437.2
1927 Female, age 91, both hemispheres 500.0
2530 Female, age 94, left hemisphere 470.1
2010 Male, age 76, both hemispheres 438.6
2531 Female, age 67, both hemispheres 418.4
2246 Female, age 85, both hemispheres 414.6
2528 Male, age 74, both hemispheres 381.6
Entorhinal gyrus
nTPM: 436.8
2764 Male, age 80, right hemisphere 482.7
2613 Female, age 94, left hemisphere 478.5
1938 Female, age 85, left hemisphere 448.7
1787 Male, age 76, left hemisphere 422.7
2686 Male, age 75, right hemisphere 410.3
2117 Female, age 91, right hemisphere 378.1
Hippocampus, CA1
nTPM: 463.0
2749 Male, age 80, left hemisphere 626.3
1873 Female, age 85, both hemispheres 451.7
2045 Male, age 76, both hemispheres 422.6
2527 Male, age 74, both hemispheres 415.4
2082 Female, age 91, right hemisphere 398.9
Hippocampus, CA2
nTPM: 434.5
1963 Male, age 80, left hemisphere 509.0
1892 Male, age 76, both hemispheres 508.7
2437 Female, age 94, left hemisphere 431.5
2113 Female, age 91, right hemisphere 390.6
1940 Female, age 85, left hemisphere 387.2
2249 Male, age 74, both hemispheres 379.7
Hippocampus, CA3
nTPM: 451.3
2137 Male, age 80, left hemisphere 536.2
2620 Female, age 94, left hemisphere 471.9
2861 Female, age 67, both hemispheres 452.9
1867 Male, age 76, both hemispheres 448.2
2436 Male, age 74, both hemispheres 400.2
1891 Female, age 85, both hemispheres 398.5
Parahippocampal cortex
nTPM: 425.2
1850 Male, age 80, both hemispheres 495.9
1990 Female, age 91, right hemisphere 445.2
2245 Female, age 91, both hemispheres 434.8
2693 Female, age 94, both hemispheres 426.7
1933 Female, age 85, both hemispheres 421.9
2532 Female, age 72, left hemisphere 418.3
2692 Male, age 74, both hemispheres 406.0
2622 Female, age 67, right hemisphere 404.7
2018 Male, age 76, both hemispheres 402.2
2250 Female, age 67, right hemisphere 396.0
Perirhinal gyrus
nTPM: 474.3
1847 Female, age 91, left hemisphere 526.8
1794 Male, age 80, right hemisphere 503.0
1841 Female, age 85, right hemisphere 462.7
2521 Female, age 94, right hemisphere 439.9
2848 Male, age 76, right hemisphere 438.9
Subiculum
nTPM: 402.9
1901 Male, age 80, both hemispheres 440.0
1977 Female, age 85, both hemispheres 431.0
2438 Female, age 94, left hemisphere 404.3
2619 Male, age 74, both hemispheres 399.0
2042 Male, age 76, both hemispheres 374.1
2729 Female, age 91, right hemisphere 369.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 469.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 469.4
Samples: 197

Max nTPM: 1027.0
Min nTPM: 122.3
Std nTPM: 193.5
Median nTPM: 447.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1027.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 989.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 984.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 946.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 926.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 890.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 856.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 850.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 847.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 843.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 843.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 720.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 720.5
FF:10169-103B7 60 years, female 916.6
FF:10153-102I9 76 years, female 524.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 234.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 204.6
Samples: 4

Max nTPM: 243.5
Min nTPM: 183.7
Sample A Female 243.5
Sample B Female 202.2
Sample C Male 188.8
Sample D Male 183.7
Entorhinal cortex
nTPM: 234.5
Samples: 4

Max nTPM: 266.6
Min nTPM: 211.2
Sample A Female 243.9
Sample B Female 266.6
Sample C Male 216.2
Sample D Male 211.2
Subiculum
nTPM: 193.4
Samples: 4

Max nTPM: 256.2
Min nTPM: 166.3
Sample A Female 256.2
Sample B Female 175.2
Sample C Male 176.0
Sample D Male 166.3
Ventral hippocampus
nTPM: 193.6
Samples: 4

Max nTPM: 219.7
Min nTPM: 153.7
Sample A Female 219.7
Sample B Female 153.7
Sample C Male 207.8
Sample D Male 193.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 836.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 778.6
Samples: 4

Max nTPM: 791.8
Min nTPM: 765.7
Sample A Male 766.4
Sample B Male 791.8
Sample C Female 790.4
Sample D Female 765.7
Hippocampal formation
nTPM: 836.7
Samples: 4

Max nTPM: 855.9
Min nTPM: 810.9
Sample A Male 855.9
Sample B Male 830.2
Sample C Female 849.7
Sample D Female 810.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.9
68563043 Antisense, RP_050125_01_A05, Mouse strain C57BL/6J (56 days, male) 26.6
70302222 Antisense, RP_050607_03_H03, Mouse strain C57BL/6J (56 days, male) 17.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.