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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:39.0 nTPM
HPA:39.0 nTPM
GTEx:58.3 nTPM
FANTOM5:23.0 Scaled Tags Per Million
Pig:10.7 nTPM
Mouse:21.3 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037811Antibody HPA037812
Glial cells Not detectedNot detected
Neuronal cells HighLow



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.0
Sample id Sample description nTPM
Hippocampus
nTPM: 36.2
1898 Male, age 80, left hemisphere 38.9
2621 Female, age 67, right hemisphere 37.3
2148 Female, age 91, left hemisphere 36.4
1855 Male, age 76, left hemisphere 35.0
2529 Female, age 94, left hemisphere 35.0
1911 Female, age 85, right hemisphere 34.5
Dentate gyrus
nTPM: 39.0
2530 Female, age 94, left hemisphere 49.5
1927 Female, age 91, both hemispheres 40.1
2010 Male, age 76, both hemispheres 38.1
2531 Female, age 67, both hemispheres 36.4
2528 Male, age 74, both hemispheres 35.5
2246 Female, age 85, both hemispheres 34.1
Entorhinal gyrus
nTPM: 35.6
2613 Female, age 94, left hemisphere 37.8
1938 Female, age 85, left hemisphere 37.4
2764 Male, age 80, right hemisphere 35.7
1787 Male, age 76, left hemisphere 35.0
2686 Male, age 75, right hemisphere 35.0
2117 Female, age 91, right hemisphere 33.0
Hippocampus, CA1
nTPM: 38.0
2749 Male, age 80, left hemisphere 47.5
2045 Male, age 76, both hemispheres 37.6
1873 Female, age 85, both hemispheres 36.3
2527 Male, age 74, both hemispheres 35.9
2082 Female, age 91, right hemisphere 32.4
Hippocampus, CA2
nTPM: 38.6
1963 Male, age 80, left hemisphere 47.8
2437 Female, age 94, left hemisphere 44.4
1892 Male, age 76, both hemispheres 40.9
2249 Male, age 74, both hemispheres 35.1
2113 Female, age 91, right hemisphere 32.3
1940 Female, age 85, left hemisphere 31.3
Hippocampus, CA3
nTPM: 37.2
2137 Male, age 80, left hemisphere 42.4
2861 Female, age 67, both hemispheres 38.6
1867 Male, age 76, both hemispheres 37.7
1891 Female, age 85, both hemispheres 36.0
2620 Female, age 94, left hemisphere 34.3
2436 Male, age 74, both hemispheres 34.1
Parahippocampal cortex
nTPM: 35.6
2245 Female, age 91, both hemispheres 38.0
2018 Male, age 76, both hemispheres 37.7
1850 Male, age 80, both hemispheres 37.5
2250 Female, age 67, right hemisphere 37.5
1990 Female, age 91, right hemisphere 36.2
1933 Female, age 85, both hemispheres 35.3
2622 Female, age 67, right hemisphere 34.4
2693 Female, age 94, both hemispheres 34.2
2532 Female, age 72, left hemisphere 33.9
2692 Male, age 74, both hemispheres 30.9
Perirhinal gyrus
nTPM: 36.9
1847 Female, age 91, left hemisphere 40.2
1794 Male, age 80, right hemisphere 38.1
1841 Female, age 85, right hemisphere 37.0
2521 Female, age 94, right hemisphere 35.8
2848 Male, age 76, right hemisphere 33.4
Subiculum
nTPM: 33.3
1901 Male, age 80, both hemispheres 36.4
1977 Female, age 85, both hemispheres 35.2
2729 Female, age 91, right hemisphere 34.1
2619 Male, age 74, both hemispheres 32.5
2042 Male, age 76, both hemispheres 31.4
2438 Female, age 94, left hemisphere 30.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.3
Samples: 197

Max nTPM: 129.7
Min nTPM: 20.1
Std nTPM: 19.7
Median nTPM: 56.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 129.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 123.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 121.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 116.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 112.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 104.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 100.7
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 100.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 96.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 94.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 93.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.0
FF:10153-102I9 76 years, female 25.1
FF:10169-103B7 60 years, female 20.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.9
Samples: 4

Max nTPM: 7.1
Min nTPM: 3.2
Sample A Female 7.1
Sample B Female 6.5
Sample C Male 3.2
Sample D Male 6.8
Entorhinal cortex
nTPM: 10.8
Samples: 4

Max nTPM: 13.1
Min nTPM: 7.8
Sample A Female 13.1
Sample B Female 12.7
Sample C Male 9.4
Sample D Male 7.8
Subiculum
nTPM: 7.7
Samples: 4

Max nTPM: 12.0
Min nTPM: 5.7
Sample A Female 12.0
Sample B Female 7.3
Sample C Male 5.7
Sample D Male 5.7
Ventral hippocampus
nTPM: 5.7
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.5
Sample A Female 4.5
Sample B Female 6.1
Sample C Male 6.5
Sample D Male 5.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.4
Samples: 4

Max nTPM: 23.6
Min nTPM: 19.9
Sample A Male 21.1
Sample B Male 20.8
Sample C Female 19.9
Sample D Female 23.6
Hippocampal formation
nTPM: 17.8
Samples: 4

Max nTPM: 21.3
Min nTPM: 15.8
Sample A Male 21.3
Sample B Male 17.0
Sample C Female 15.8
Sample D Female 16.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
71764482 Antisense, RP_050926_01_C05, Mouse strain C57BL/6J (56 days, male) 1.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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