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SOX15
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:14.5 nTPM
HPA:14.5 nTPM
GTEx:13.0 nTPM
FANTOM5:0.1 Scaled Tags Per Million
Mouse:0.2 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067196
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.5
Sample id Sample description nTPM
Hippocampus
nTPM: 13.4
2148 Female, age 91, left hemisphere 14.4
2621 Female, age 67, right hemisphere 14.0
2529 Female, age 94, left hemisphere 13.7
1911 Female, age 85, right hemisphere 12.9
1855 Male, age 76, left hemisphere 12.8
1898 Male, age 80, left hemisphere 12.8
Dentate gyrus
nTPM: 13.5
2531 Female, age 67, both hemispheres 14.9
2246 Female, age 85, both hemispheres 14.2
2528 Male, age 74, both hemispheres 13.4
2530 Female, age 94, left hemisphere 13.3
2010 Male, age 76, both hemispheres 12.8
1927 Female, age 91, both hemispheres 12.3
Entorhinal gyrus
nTPM: 14.1
2117 Female, age 91, right hemisphere 14.6
2686 Male, age 75, right hemisphere 14.5
2764 Male, age 80, right hemisphere 14.4
1787 Male, age 76, left hemisphere 14.0
1938 Female, age 85, left hemisphere 13.7
2613 Female, age 94, left hemisphere 13.6
Hippocampus, CA1
nTPM: 13.0
2527 Male, age 74, both hemispheres 14.5
2045 Male, age 76, both hemispheres 13.6
2082 Female, age 91, right hemisphere 13.4
1873 Female, age 85, both hemispheres 12.7
2749 Male, age 80, left hemisphere 10.9
Hippocampus, CA2
nTPM: 13.2
2437 Female, age 94, left hemisphere 14.4
2113 Female, age 91, right hemisphere 13.8
1940 Female, age 85, left hemisphere 13.6
1892 Male, age 76, both hemispheres 13.4
2249 Male, age 74, both hemispheres 12.9
1963 Male, age 80, left hemisphere 11.1
Hippocampus, CA3
nTPM: 13.5
2620 Female, age 94, left hemisphere 15.3
2861 Female, age 67, both hemispheres 15.0
1867 Male, age 76, both hemispheres 13.1
2436 Male, age 74, both hemispheres 13.1
1891 Female, age 85, both hemispheres 12.8
2137 Male, age 80, left hemisphere 11.5
Parahippocampal cortex
nTPM: 14.5
2622 Female, age 67, right hemisphere 16.6
2245 Female, age 91, both hemispheres 16.0
2532 Female, age 72, left hemisphere 15.0
2018 Male, age 76, both hemispheres 14.4
2692 Male, age 74, both hemispheres 14.4
2693 Female, age 94, both hemispheres 14.3
2250 Female, age 67, right hemisphere 14.0
1850 Male, age 80, both hemispheres 13.8
1933 Female, age 85, both hemispheres 13.8
1990 Female, age 91, right hemisphere 13.1
Perirhinal gyrus
nTPM: 13.8
2848 Male, age 76, right hemisphere 14.4
1794 Male, age 80, right hemisphere 14.1
1841 Female, age 85, right hemisphere 13.9
1847 Female, age 91, left hemisphere 13.4
2521 Female, age 94, right hemisphere 13.0
Subiculum
nTPM: 13.9
2619 Male, age 74, both hemispheres 15.9
2438 Female, age 94, left hemisphere 14.8
1977 Female, age 85, both hemispheres 13.8
2729 Female, age 91, right hemisphere 13.2
2042 Male, age 76, both hemispheres 13.1
1901 Male, age 80, both hemispheres 12.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.0
Samples: 197

Max nTPM: 38.4
Min nTPM: 5.2
Std nTPM: 4.6
Median nTPM: 12.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 38.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 32.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 27.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 25.5
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 22.0
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 21.7
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 21.6
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 21.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 21.2
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 20.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 20.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 0.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 0.1
FF:10153-102I9 76 years, female 0.3
FF:10169-103B7 60 years, female 0.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.2
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.1
Sample A Male 0.1
Sample B Male 0.3
Sample C Female 0.1
Sample D Female 0.2
Hippocampal formation
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Male 0.2
Sample B Male 0.1
Sample C Female 0.0
Sample D Female 0.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
73606540 Antisense, RP_051130_01_B07, Mouse strain C57BL/6J (56 days, male) 1.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.