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SNX6
AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:38.0 nTPM
HPA:38.0 nTPM
GTEx:37.2 nTPM
FANTOM5:31.4 Scaled Tags Per Million
Pig:22.1 nTPM
Mouse:42.2 nTPM
Allen mouse:0.3 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 38.0
Sample id Sample description nTPM
Amygdala
nTPM: 36.8
2695 Female, age 67, right hemisphere 39.5
2814 Male, age 76, right hemisphere 38.3
2514 Male, age 75, right hemisphere 38.2
2517 Female, age 94, left hemisphere 35.0
1987 Female, age 91, left hemisphere 33.0
Basal amygdala
nTPM: 36.2
2827 Female, age 67, right hemisphere 44.3
2685 Female, age 94, left hemisphere 36.4
1955 Male, age 76, both hemispheres 36.2
2609 Male, age 75, right hemisphere 35.3
2110 Male, age 80, left hemisphere 33.7
2243 Female, age 91, right hemisphere 31.5
Central amygdala
nTPM: 36.8
2826 Female, age 94, left hemisphere 43.7
1905 Male, age 76, both hemispheres 37.2
2515 Male, age 75, right hemisphere 35.3
2239 Male, age 80, left hemisphere 34.5
2701 Female, age 91, right hemisphere 33.3
Corticomedial amygdala
nTPM: 34.2
2535 Female, age 67, right hemisphere 36.3
2428 Male, age 75, right hemisphere 35.5
2429 Female, age 94, left hemisphere 34.9
2240 Male, age 76, both hemispheres 34.3
2829 Male, age 80, left hemisphere 32.4
2242 Female, age 91, right hemisphere 31.7
Lateral amygdala
nTPM: 38.0
2830 Female, age 67, right hemisphere 49.9
2516 Male, age 75, right hemisphere 38.0
2534 Female, age 94, left hemisphere 37.1
1883 Male, age 76, both hemispheres 35.8
2256 Male, age 80, left hemisphere 34.5
2255 Female, age 91, right hemisphere 32.6
Stria terminalis, bed nucleus
nTPM: 32.1
2201 Male, age 74, unknown 33.5
1974 Female, age 91, both hemispheres 33.2
2486 Female, age 94, both hemispheres 29.7

AMYGDALA - GTEx RNA-seqi
Average nTPM 37.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 37.2
Samples: 152

Max nTPM: 78.6
Min nTPM: 17.8
Std nTPM: 13.2
Median nTPM: 33.7
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 78.6
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 72.4
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 72.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 71.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 71.2
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 70.5
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 67.3
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 64.5
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 64.4
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 64.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 62.5
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 31.4
FF:10151-102I7 76 years, female 31.4

AMYGDALA - Pig RNA-seqi
Average nTPM 22.1
Pig sample Sample description nTPM
Amygdala
nTPM: 22.1
Samples: 4

Max nTPM: 27.6
Min nTPM: 19.4
Sample A Female 21.9
Sample B Female 27.6
Sample C Male 19.6
Sample D Male 19.4

AMYGDALA - Mouse RNA-seqi
Average nTPM 42.2
Mouse sample Sample description nTPM
Amygdala
nTPM: 42.2
Samples: 4

Max nTPM: 43.6
Min nTPM: 40.8
Sample A Male 41.4
Sample B Male 40.8
Sample C Female 43.1
Sample D Female 43.6

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.3
69117026 Antisense, RP_050321_01_F02, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.