ABOUTMENU
HELP
NEWS
EGLN3
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:40.9 nTPM
HPA:40.9 nTPM
GTEx:27.3 nTPM
FANTOM5:16.7 Scaled Tags Per Million
Pig:4.0 nTPM
Mouse:8.7 nTPM

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 40.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 29.6
2481 Female, age 94, left hemisphere 38.1
2289 Male, age 61, right hemisphere 37.3
2288 Male, age 75, left hemisphere 36.5
1854 Male, age 80, left hemisphere 26.7
2290 Female, age 72, unknown 26.2
2846 Female, age 79, unknown 25.3
1781 Male, age 74, unknown 24.5
1857 Female, age 85, left hemisphere 22.3
Claustrum
nTPM: 25.3
2292 Female, age 85, both hemispheres 28.2
1956 Male, age 74, unknown 27.4
2491 Male, age 75, both hemispheres 26.8
2198 Male, age 80, both hemispheres 25.5
2392 Female, age 94, both hemispheres 25.0
2196 Female, age 79, unknown 24.6
2284 Female, age 91, both hemispheres 23.8
2568 Male, age 61, both hemispheres 23.4
2645 Female, age 72, unknown 23.3
Globus pallidus, externus
nTPM: 40.1
2646 Male, age 61, right hemisphere 48.4
1996 Male, age 80, right hemisphere 47.8
2772 Female, age 79, unknown 38.6
2567 Female, age 72, unknown 35.4
2395 Male, age 75, both hemispheres 30.3
Globus pallidus, internus
nTPM: 40.9
2111 Female, age 85, right hemisphere 45.7
2483 Female, age 94, right hemisphere 43.5
2037 Male, age 80, right hemisphere 42.0
1818 Male, age 74, unknown 39.9
2778 Female, age 91, both hemispheres 39.6
2566 Female, age 72, unknown 38.5
2287 Male, age 75, right hemisphere 37.1
Nucleus accumbens
nTPM: 29.9
2286 Male, age 75, left hemisphere 38.1
2391 Female, age 94, left hemisphere 33.8
2824 Male, age 61, right hemisphere 33.7
2732 Male, age 80, right hemisphere 29.2
2698 Female, age 72, unknown 28.4
1806 Female, age 85, left hemisphere 27.5
1783 Male, age 74, unknown 25.3
1856 Female, age 91, right hemisphere 23.3
Nucleus basalis of Meynert
nTPM: 32.8
2569 Male, age 61, both hemispheres 50.3
2393 Male, age 80, right hemisphere 27.4
2484 Female, age 94, left hemisphere 26.8
2821 Male, age 75, both hemispheres 26.6
Nucleus of the diagonal band
nTPM: 23.7
1979 Male, age 74, unknown 25.0
1812 Female, age 91, both hemispheres 24.9
2195 Female, age 85, both hemispheres 23.8
2775 Male, age 80, right hemisphere 22.9
2029 Male, age 61, right hemisphere 21.8
Olfactory tubercle
nTPM: 25.7
2856 Male, age 75, right hemisphere 28.5
1846 Male, age 80, right hemisphere 25.6
2487 Female, age 94, left hemisphere 24.9
1998 Female, age 91, both hemispheres 23.8
Putamen
nTPM: 26.6
2482 Female, age 94, left hemisphere 31.9
2647 Male, age 75, left hemisphere 31.0
1937 Female, age 91, right hemisphere 26.6
1829 Male, age 74, unknown 26.4
2489 Female, age 72, unknown 24.2
2466 Female, age 79, unknown 23.8
1838 Male, age 80, right hemisphere 22.2
Septal nuclei
nTPM: 26.6
2394 Male, age 61, left hemisphere 31.5
2059 Female, age 85, both hemispheres 30.7
2199 Male, age 80, right hemisphere 26.4
2009 Female, age 91, both hemispheres 25.4
2031 Female, age 72, unknown 24.7
2629 Female, age 94, right hemisphere 24.1
1960 Male, age 74, unknown 23.5

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 27.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 25.9
Samples: 246

Max nTPM: 62.7
Min nTPM: 7.8
Std nTPM: 9.2
Median nTPM: 25.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 62.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 60.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 55.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 50.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 47.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 45.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 45.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 45.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 45.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 44.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 44.4
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 23.9
Samples: 246

Max nTPM: 68.8
Min nTPM: 7.4
Std nTPM: 10.4
Median nTPM: 23.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 68.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 65.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 63.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 62.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 62.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 51.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 48.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 47.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 45.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 45.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 44.1
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 27.3
Samples: 205

Max nTPM: 68.3
Min nTPM: 5.7
Std nTPM: 9.9
Median nTPM: 26.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 68.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 65.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 63.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 52.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 50.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 49.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 47.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 44.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 43.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 42.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 42.0
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 13.8
FF:10164-103B2 76 years, female 13.8
Globus pallidus
Scaled Tags Per Million: 16.7
FF:10175-103C4 60 years, female 17.3
FF:10161-103A8 76 years, female 16.0
Nucleus accumbens
Scaled Tags Per Million: 12.6
FF:10037-101F1 23-56 years, mixed 12.6
Putamen
Scaled Tags Per Million: 9.0
FF:10176-103C5 60 years, female 9.0

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 4.0
Pig sample Sample description nTPM
Caudate
nTPM: 2.8
Samples: 4

Max nTPM: 3.0
Min nTPM: 2.6
Sample A Female 2.8
Sample B Female 3.0
Sample C Male 2.7
Sample D Male 2.6
Putamen
nTPM: 4.0
Samples: 4

Max nTPM: 5.2
Min nTPM: 2.2
Sample A Female 5.2
Sample B Female 2.2
Sample C Male 3.7
Sample D Male 4.9
Septum
nTPM: 3.2
Samples: 4

Max nTPM: 4.9
Min nTPM: 2.3
Sample A Female 2.4
Sample B Female 2.3
Sample C Male 3.1
Sample D Male 4.9
Ventral pallidum
nTPM: 3.2
Samples: 4

Max nTPM: 5.0
Min nTPM: 1.3
Sample A Female 1.3
Sample B Female 2.7
Sample C Male 3.8
Sample D Male 5.0

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 8.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 2.5
Samples: 4

Max nTPM: 3.6
Min nTPM: 1.1
Sample A Male 1.9
Sample B Male 1.1
Sample C Female 3.6
Sample D Female 3.4
Septum
nTPM: 8.7
Samples: 4

Max nTPM: 11.3
Min nTPM: 6.9
Sample A Male 6.9
Sample B Male 11.3
Sample C Female 8.6
Sample D Female 7.9
Ventral forebrain
nTPM: 7.6
Samples: 4

Max nTPM: 8.4
Min nTPM: 6.1
Sample A Male 7.5
Sample B Male 6.1
Sample C Female 8.4
Sample D Female 8.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.