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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:163.1 nTPM
HPA:163.1 nTPM
GTEx:211.9 nTPM
FANTOM5:148.9 Scaled Tags Per Million
Pig:81.5 nTPM
Mouse:228.0 nTPM
Allen mouse:14.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB004082
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 163.1
Sample id Sample description nTPM
Hippocampus
nTPM: 156.5
1898 Male, age 80, left hemisphere 163.3
2621 Female, age 67, right hemisphere 159.3
1855 Male, age 76, left hemisphere 157.3
2148 Female, age 91, left hemisphere 154.6
2529 Female, age 94, left hemisphere 153.6
1911 Female, age 85, right hemisphere 151.1
Dentate gyrus
nTPM: 154.1
1927 Female, age 91, both hemispheres 158.7
2530 Female, age 94, left hemisphere 158.2
2010 Male, age 76, both hemispheres 155.0
2246 Female, age 85, both hemispheres 154.0
2531 Female, age 67, both hemispheres 149.9
2528 Male, age 74, both hemispheres 148.7
Entorhinal gyrus
nTPM: 156.3
1938 Female, age 85, left hemisphere 159.9
2764 Male, age 80, right hemisphere 159.3
1787 Male, age 76, left hemisphere 156.6
2686 Male, age 75, right hemisphere 155.5
2613 Female, age 94, left hemisphere 154.5
2117 Female, age 91, right hemisphere 152.2
Hippocampus, CA1
nTPM: 158.2
2749 Male, age 80, left hemisphere 168.9
1873 Female, age 85, both hemispheres 158.8
2045 Male, age 76, both hemispheres 158.1
2527 Male, age 74, both hemispheres 156.0
2082 Female, age 91, right hemisphere 149.0
Hippocampus, CA2
nTPM: 156.7
1892 Male, age 76, both hemispheres 167.1
1963 Male, age 80, left hemisphere 160.8
2437 Female, age 94, left hemisphere 155.6
2249 Male, age 74, both hemispheres 153.5
1940 Female, age 85, left hemisphere 152.6
2113 Female, age 91, right hemisphere 150.5
Hippocampus, CA3
nTPM: 156.3
2137 Male, age 80, left hemisphere 164.5
1867 Male, age 76, both hemispheres 161.0
2436 Male, age 74, both hemispheres 154.8
1891 Female, age 85, both hemispheres 154.7
2620 Female, age 94, left hemisphere 153.1
2861 Female, age 67, both hemispheres 149.5
Parahippocampal cortex
nTPM: 158.2
1850 Male, age 80, both hemispheres 169.0
2245 Female, age 91, both hemispheres 160.6
2532 Female, age 72, left hemisphere 159.2
1933 Female, age 85, both hemispheres 158.0
2018 Male, age 76, both hemispheres 157.6
2250 Female, age 67, right hemisphere 157.5
1990 Female, age 91, right hemisphere 156.8
2692 Male, age 74, both hemispheres 155.8
2693 Female, age 94, both hemispheres 154.7
2622 Female, age 67, right hemisphere 153.3
Perirhinal gyrus
nTPM: 163.1
1841 Female, age 85, right hemisphere 166.6
1847 Female, age 91, left hemisphere 166.3
1794 Male, age 80, right hemisphere 164.3
2848 Male, age 76, right hemisphere 161.4
2521 Female, age 94, right hemisphere 157.1
Subiculum
nTPM: 155.1
1901 Male, age 80, both hemispheres 159.4
1977 Female, age 85, both hemispheres 158.4
2438 Female, age 94, left hemisphere 155.7
2619 Male, age 74, both hemispheres 155.4
2042 Male, age 76, both hemispheres 153.8
2729 Female, age 91, right hemisphere 147.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 211.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 211.9
Samples: 197

Max nTPM: 566.7
Min nTPM: 97.3
Std nTPM: 70.9
Median nTPM: 194.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 566.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 440.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 409.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 403.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 392.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 391.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 386.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 382.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 359.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 354.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 350.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 148.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 148.9
FF:10153-102I9 76 years, female 150.3
FF:10169-103B7 60 years, female 147.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 81.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 81.4
Samples: 4

Max nTPM: 111.7
Min nTPM: 59.4
Sample A Female 111.7
Sample B Female 80.8
Sample C Male 73.8
Sample D Male 59.4
Entorhinal cortex
nTPM: 64.4
Samples: 4

Max nTPM: 76.2
Min nTPM: 46.5
Sample A Female 69.5
Sample B Female 76.2
Sample C Male 65.2
Sample D Male 46.5
Subiculum
nTPM: 61.3
Samples: 4

Max nTPM: 85.0
Min nTPM: 52.9
Sample A Female 85.0
Sample B Female 53.0
Sample C Male 54.1
Sample D Male 52.9
Ventral hippocampus
nTPM: 69.7
Samples: 4

Max nTPM: 80.0
Min nTPM: 47.7
Sample A Female 75.7
Sample B Female 47.7
Sample C Male 75.4
Sample D Male 80.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 228.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 228.0
Samples: 4

Max nTPM: 247.2
Min nTPM: 199.7
Sample A Male 199.7
Sample B Male 226.2
Sample C Female 239.0
Sample D Female 247.2
Hippocampal formation
nTPM: 227.3
Samples: 4

Max nTPM: 263.1
Min nTPM: 211.2
Sample A Male 263.1
Sample B Male 211.2
Sample C Female 220.9
Sample D Female 213.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.1
393259 Antisense, RP_040809_01_B01, Mouse strain C57BL/6J (56 days, male) 14.1

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