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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:211.4 nTPM
HPA:211.4 nTPM
GTEx:167.8 nTPM
FANTOM5:158.3 Scaled Tags Per Million
Pig:52.8 nTPM
Mouse:165.2 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028882
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 211.4
Sample id Sample description nTPM
Hippocampus
nTPM: 211.4
1898 Male, age 80, left hemisphere 218.5
2621 Female, age 67, right hemisphere 213.8
1855 Male, age 76, left hemisphere 211.4
2529 Female, age 94, left hemisphere 211.0
1911 Female, age 85, right hemisphere 209.9
2148 Female, age 91, left hemisphere 203.6
Dentate gyrus
nTPM: 204.8
2010 Male, age 76, both hemispheres 213.5
2528 Male, age 74, both hemispheres 211.2
2246 Female, age 85, both hemispheres 206.8
2530 Female, age 94, left hemisphere 202.3
1927 Female, age 91, both hemispheres 201.4
2531 Female, age 67, both hemispheres 193.6
Entorhinal gyrus
nTPM: 199.0
2117 Female, age 91, right hemisphere 210.9
1938 Female, age 85, left hemisphere 203.0
1787 Male, age 76, left hemisphere 198.8
2764 Male, age 80, right hemisphere 198.6
2686 Male, age 75, right hemisphere 196.3
2613 Female, age 94, left hemisphere 186.6
Hippocampus, CA1
nTPM: 208.7
2527 Male, age 74, both hemispheres 213.9
1873 Female, age 85, both hemispheres 211.7
2045 Male, age 76, both hemispheres 208.4
2749 Male, age 80, left hemisphere 208.4
2082 Female, age 91, right hemisphere 201.3
Hippocampus, CA2
nTPM: 206.8
2249 Male, age 74, both hemispheres 223.0
1963 Male, age 80, left hemisphere 210.5
1892 Male, age 76, both hemispheres 204.4
1940 Female, age 85, left hemisphere 202.6
2113 Female, age 91, right hemisphere 200.1
2437 Female, age 94, left hemisphere 199.9
Hippocampus, CA3
nTPM: 205.0
2436 Male, age 74, both hemispheres 226.4
1891 Female, age 85, both hemispheres 211.1
1867 Male, age 76, both hemispheres 201.9
2137 Male, age 80, left hemisphere 198.3
2620 Female, age 94, left hemisphere 197.9
2861 Female, age 67, both hemispheres 194.4
Parahippocampal cortex
nTPM: 197.8
2018 Male, age 76, both hemispheres 204.5
1933 Female, age 85, both hemispheres 201.7
2532 Female, age 72, left hemisphere 200.0
2692 Male, age 74, both hemispheres 199.2
2250 Female, age 67, right hemisphere 198.1
1850 Male, age 80, both hemispheres 197.7
1990 Female, age 91, right hemisphere 197.1
2245 Female, age 91, both hemispheres 195.5
2622 Female, age 67, right hemisphere 192.0
2693 Female, age 94, both hemispheres 192.0
Perirhinal gyrus
nTPM: 197.2
1847 Female, age 91, left hemisphere 200.5
1841 Female, age 85, right hemisphere 198.1
2521 Female, age 94, right hemisphere 197.0
1794 Male, age 80, right hemisphere 196.1
2848 Male, age 76, right hemisphere 194.5
Subiculum
nTPM: 207.8
2042 Male, age 76, both hemispheres 217.4
1901 Male, age 80, both hemispheres 207.9
2729 Female, age 91, right hemisphere 207.1
2619 Male, age 74, both hemispheres 206.3
1977 Female, age 85, both hemispheres 204.0
2438 Female, age 94, left hemisphere 204.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 167.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 167.8
Samples: 197

Max nTPM: 292.7
Min nTPM: 105.2
Std nTPM: 33.8
Median nTPM: 162.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 292.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 268.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 255.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 246.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 239.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 238.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 233.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 231.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 228.0
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 227.3
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 223.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 158.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 158.3
FF:10169-103B7 60 years, female 198.8
FF:10153-102I9 76 years, female 117.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 52.8
Samples: 4

Max nTPM: 69.5
Min nTPM: 40.2
Sample A Female 69.5
Sample B Female 43.6
Sample C Male 57.9
Sample D Male 40.2
Entorhinal cortex
nTPM: 39.5
Samples: 4

Max nTPM: 47.5
Min nTPM: 30.0
Sample A Female 30.0
Sample B Female 46.7
Sample C Male 47.5
Sample D Male 33.6
Subiculum
nTPM: 42.8
Samples: 4

Max nTPM: 58.3
Min nTPM: 33.0
Sample A Female 58.3
Sample B Female 41.3
Sample C Male 33.0
Sample D Male 38.5
Ventral hippocampus
nTPM: 46.1
Samples: 4

Max nTPM: 52.2
Min nTPM: 43.4
Sample A Female 43.4
Sample B Female 43.4
Sample C Male 52.2
Sample D Male 45.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 165.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 130.5
Samples: 4

Max nTPM: 138.4
Min nTPM: 123.6
Sample A Male 123.6
Sample B Male 125.7
Sample C Female 138.4
Sample D Female 134.4
Hippocampal formation
nTPM: 165.2
Samples: 4

Max nTPM: 176.3
Min nTPM: 153.8
Sample A Male 163.0
Sample B Male 153.8
Sample C Female 176.3
Sample D Female 167.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
69838004 Antisense, RP_050224_01_E09, Mouse strain C57BL/6J (56 days, male) 3.6
74819345 Antisense, RP_060315_02_E12, Mouse strain C57BL/6J (56 days, male) 1.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.