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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:20.2 nTPM
HPA:20.2 nTPM
GTEx:17.9 nTPM
FANTOM5:35.9 Scaled Tags Per Million
Pig:14.5 nTPM
Mouse:28.2 nTPM
Allen mouse:25.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042289
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.2
Sample id Sample description nTPM
Hippocampus
nTPM: 15.6
1898 Male, age 80, left hemisphere 19.0
1911 Female, age 85, right hemisphere 15.7
1855 Male, age 76, left hemisphere 15.6
2621 Female, age 67, right hemisphere 14.6
2148 Female, age 91, left hemisphere 14.5
2529 Female, age 94, left hemisphere 14.4
Dentate gyrus
nTPM: 15.5
1927 Female, age 91, both hemispheres 17.6
2246 Female, age 85, both hemispheres 16.1
2531 Female, age 67, both hemispheres 15.8
2010 Male, age 76, both hemispheres 15.2
2530 Female, age 94, left hemisphere 14.5
2528 Male, age 74, both hemispheres 13.9
Entorhinal gyrus
nTPM: 17.8
2613 Female, age 94, left hemisphere 20.1
1938 Female, age 85, left hemisphere 19.2
1787 Male, age 76, left hemisphere 18.3
2764 Male, age 80, right hemisphere 17.1
2686 Male, age 75, right hemisphere 16.7
2117 Female, age 91, right hemisphere 15.7
Hippocampus, CA1
nTPM: 16.1
1873 Female, age 85, both hemispheres 18.1
2045 Male, age 76, both hemispheres 16.4
2527 Male, age 74, both hemispheres 15.9
2749 Male, age 80, left hemisphere 15.4
2082 Female, age 91, right hemisphere 14.4
Hippocampus, CA2
nTPM: 16.1
1892 Male, age 76, both hemispheres 18.3
1940 Female, age 85, left hemisphere 18.2
2113 Female, age 91, right hemisphere 16.0
2249 Male, age 74, both hemispheres 14.9
2437 Female, age 94, left hemisphere 14.8
1963 Male, age 80, left hemisphere 14.4
Hippocampus, CA3
nTPM: 15.7
1891 Female, age 85, both hemispheres 17.0
2137 Male, age 80, left hemisphere 16.9
1867 Male, age 76, both hemispheres 16.3
2620 Female, age 94, left hemisphere 15.9
2436 Male, age 74, both hemispheres 14.6
2861 Female, age 67, both hemispheres 13.6
Parahippocampal cortex
nTPM: 16.7
1850 Male, age 80, both hemispheres 22.4
1990 Female, age 91, right hemisphere 18.2
2693 Female, age 94, both hemispheres 18.0
1933 Female, age 85, both hemispheres 17.0
2250 Female, age 67, right hemisphere 16.1
2532 Female, age 72, left hemisphere 15.9
2018 Male, age 76, both hemispheres 15.7
2692 Male, age 74, both hemispheres 14.9
2245 Female, age 91, both hemispheres 14.4
2622 Female, age 67, right hemisphere 14.3
Perirhinal gyrus
nTPM: 20.2
1794 Male, age 80, right hemisphere 21.7
1841 Female, age 85, right hemisphere 21.6
1847 Female, age 91, left hemisphere 20.4
2848 Male, age 76, right hemisphere 19.2
2521 Female, age 94, right hemisphere 18.0
Subiculum
nTPM: 15.4
1901 Male, age 80, both hemispheres 17.7
1977 Female, age 85, both hemispheres 16.3
2619 Male, age 74, both hemispheres 15.2
2042 Male, age 76, both hemispheres 14.9
2438 Female, age 94, left hemisphere 14.8
2729 Female, age 91, right hemisphere 13.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.9
Samples: 197

Max nTPM: 27.5
Min nTPM: 9.8
Std nTPM: 3.1
Median nTPM: 17.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 27.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 27.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 27.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 26.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 25.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 24.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 24.8
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 24.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 23.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 23.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 23.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.9
FF:10153-102I9 76 years, female 37.4
FF:10169-103B7 60 years, female 34.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.5
Samples: 4

Max nTPM: 15.1
Min nTPM: 13.7
Sample A Female 15.1
Sample B Female 15.0
Sample C Male 14.2
Sample D Male 13.7
Entorhinal cortex
nTPM: 12.4
Samples: 4

Max nTPM: 13.1
Min nTPM: 12.1
Sample A Female 12.2
Sample B Female 13.1
Sample C Male 12.1
Sample D Male 12.1
Subiculum
nTPM: 13.4
Samples: 4

Max nTPM: 14.0
Min nTPM: 12.7
Sample A Female 13.3
Sample B Female 14.0
Sample C Male 13.5
Sample D Male 12.7
Ventral hippocampus
nTPM: 14.1
Samples: 4

Max nTPM: 14.6
Min nTPM: 13.5
Sample A Female 13.5
Sample B Female 14.1
Sample C Male 14.3
Sample D Male 14.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.7
Samples: 4

Max nTPM: 26.2
Min nTPM: 20.8
Sample A Male 22.0
Sample B Male 20.8
Sample C Female 26.2
Sample D Female 21.6
Hippocampal formation
nTPM: 28.2
Samples: 4

Max nTPM: 30.4
Min nTPM: 25.9
Sample A Male 29.5
Sample B Male 25.9
Sample C Female 30.4
Sample D Female 27.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 25.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.3
513225 Antisense, RP_040810_01_B12, Mouse strain C57BL/6J (56 days, male) 25.3

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The Human Protein Atlas

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