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ABHD17A
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:54.2 nTPM
HPA:54.2 nTPM
GTEx:117.3 nTPM
FANTOM5:12.0 Scaled Tags Per Million
Pig:52.4 nTPM
Mouse:43.8 nTPM
Allen mouse:0.1 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 54.2
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 48.7
2586 Male, age 75, left hemisphere 74.0
2828 Female, age 72, unknown 57.0
2019 Male, age 18, unknown 50.8
2411 Female, age 72, unknown 47.2
2666 Male, age 74, left hemisphere 46.9
1830 Male, age 51, unknown 45.3
1833 Male, age 53, unknown 43.9
1827 Male, age 72, unknown 43.2
1870 Female, age 42, unknown 42.5
2219 Male, age 76, both hemispheres 36.1
Dorsal raphe nucleus
nTPM: 34.0
2750 Male, age 76, both hemispheres 47.9
1828 Male, age 53, unknown 36.7
2016 Female, age 72, unknown 29.6
2047 Male, age 72, unknown 27.9
2298 Female, age 72, unknown 27.6
Inferior colliculus
nTPM: 39.0
1890 Male, age 53, unknown 41.5
1848 Female, age 42, unknown 40.7
2097 Female, age 72, unknown 39.3
2849 Male, age 72, unknown 34.7
Median raphe nucleus
nTPM: 28.6
2220 Male, age 76, midline 28.6
Pedunculopontine tegmental nucleus
nTPM: 38.8
2334 Male, age 80, both hemispheres 44.2
2338 Male, age 61, both hemispheres 38.0
1921 Female, age 85, both hemispheres 34.3
Periaquaductal grey, anterior
nTPM: 42.4
2502 Female, age 75, unknown 47.4
1795 Male, age 51, unknown 41.1
1947 Male, age 18, unknown 38.8
Periaquaductal grey, dorsal
nTPM: 25.6
2464 Female, age 72, unknown 34.4
1831 Male, age 72, unknown 31.2
1840 Male, age 53, unknown 22.1
2850 Male, age 76, both hemispheres 14.8
Periaquaductal grey, lateral
nTPM: 24.8
2272 Male, age 74, both hemispheres 30.0
2053 Male, age 18, unknown 28.9
2140 Male, age 76, both hemispheres 15.6
Pretectal area
nTPM: 41.1
2007 Male, age 72, unknown 60.2
1817 Female, age 42, unknown 54.1
1816 Male, age 51, unknown 51.7
1815 Male, age 53, unknown 48.8
1944 Female, age 72, unknown 48.0
2407 Male, age 75, both hemispheres 39.3
2667 Female, age 75, unknown 36.2
2825 Male, age 18, unknown 32.8
2316 Male, age 76, right hemisphere 30.2
2273 Male, age 74, both hemispheres 26.9
2224 Female, age 72, unknown 24.3
Red nucleus
nTPM: 54.2
2785 Male, age 18, unknown 65.9
2769 Male, age 72, unknown 61.6
2584 Male, age 75, left hemisphere 60.0
2588 Male, age 74, left hemisphere 58.6
2227 Male, age 72, unknown 58.2
2503 Female, age 72, unknown 56.3
1904 Male, age 53, unknown 54.4
1865 Male, age 51, unknown 51.2
2823 Male, age 76, right hemisphere 51.2
1954 Female, age 42, unknown 48.0
1821 Female, age 72, unknown 45.1
2725 Female, age 75, unknown 39.5
Substantia nigra
nTPM: 38.3
2583 Male, age 75, right hemisphere 57.1
2665 Male, age 74, both hemispheres 50.1
1889 Female, age 72, unknown 45.2
1916 Female, age 42, unknown 41.2
2590 Female, age 75, unknown 39.9
1851 Male, age 51, unknown 39.7
1941 Male, age 53, unknown 37.1
2699 Male, age 18, unknown 29.3
2409 Female, age 72, unknown 23.4
2241 Male, age 72, unknown 20.1
Superior colliculus
nTPM: 45.9
2668 Female, age 75, unknown 56.0
2664 Male, age 75, both hemispheres 53.9
1913 Female, age 42, unknown 50.3
2087 Female, age 72, unknown 49.9
1995 Male, age 72, unknown 48.7
2261 Male, age 18, unknown 47.9
1796 Male, age 53, unknown 45.7
2587 Male, age 74, left hemisphere 38.7
1839 Male, age 51, unknown 37.6
1895 Male, age 76, right hemisphere 29.8
Ventral tegmental area
nTPM: 40.6
2223 Female, age 72, unknown 53.4
2410 Female, age 72, unknown 43.4
1942 Male, age 51, unknown 39.8
2218 Male, age 76, both hemispheres 37.4
1915 Female, age 42, unknown 37.0
2021 Male, age 53, unknown 32.7

MIDBRAIN - GTEx RNA-seqi
Average nTPM 117.3
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 117.3
Samples: 139

Max nTPM: 347.9
Min nTPM: 33.3
Std nTPM: 40.9
Median nTPM: 114.4
GTEX-ZE9C-0011-R2a-SM-4WKGH 60-69 years, male 347.9
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 316.2
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 226.0
GTEX-11EMC-0011-R2b-SM-DO114 60-69 years, female 203.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 202.1
GTEX-17HG3-0011-R2a-SM-7MGVX 30-39 years, female 186.0
GTEX-1F75B-0011-R2a-SM-ARL8I 50-59 years, male 174.6
GTEX-11PRG-0011-R2a-SM-69LQ5 50-59 years, male 172.3
GTEX-12WSD-0011-R2a-SM-5LZWB 60-69 years, female 169.1
GTEX-ZDXO-0011-R2b-SM-4WKFG 60-69 years, male 167.7
GTEX-1I1CD-0011-R2a-SM-CM2T3 60-69 years, female 167.4
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 12.0
FF:10158-103A5 76 years, female 12.0

MIDBRAIN - Pig RNA-seqi
Average nTPM 52.4
Pig sample Sample description nTPM
Midbrain
nTPM: 52.5
Samples: 4

Max nTPM: 78.6
Min nTPM: 39.2
Sample A Female 78.6
Sample B Female 40.4
Sample C Male 51.6
Sample D Male 39.2
Periaqueductal gray
nTPM: 35.0
Samples: 3

Max nTPM: 37.6
Min nTPM: 32.7
Sample B Female 34.8
Sample C Male 37.6
Sample D Male 32.7
Substantia nigra
nTPM: 45.8
Samples: 4

Max nTPM: 50.6
Min nTPM: 37.8
Sample A Female 50.6
Sample B Female 37.8
Sample C Male 46.6
Sample D Male 48.0
Superior colliculi
nTPM: 47.9
Samples: 4

Max nTPM: 51.4
Min nTPM: 45.3
Sample A Female 46.3
Sample B Female 45.3
Sample C Male 51.4
Sample D Male 48.4

MIDBRAIN - Mouse RNA-seqi
Average nTPM 43.8
Mouse sample Sample description nTPM
Midbrain
nTPM: 43.8
Samples: 4

Max nTPM: 51.3
Min nTPM: 39.4
Sample A Male 51.3
Sample B Male 39.4
Sample C Female 39.6
Sample D Female 44.8

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.1
69549674 Antisense, RP_050317_04_E11, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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