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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:30.7 nTPM
HPA:30.7 nTPM
GTEx:32.9 nTPM
FANTOM5:4.9 Scaled Tags Per Million
Pig:54.1 nTPM
Mouse:59.2 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036231Antibody HPA036232
Glial cells LowLow
Neuronal cells MediumMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.7
Sample id Sample description nTPM
Hippocampus
nTPM: 29.8
1898 Male, age 80, left hemisphere 33.6
2621 Female, age 67, right hemisphere 32.5
2529 Female, age 94, left hemisphere 29.5
1911 Female, age 85, right hemisphere 28.3
1855 Male, age 76, left hemisphere 27.9
2148 Female, age 91, left hemisphere 27.0
Dentate gyrus
nTPM: 29.7
2530 Female, age 94, left hemisphere 34.5
1927 Female, age 91, both hemispheres 31.3
2010 Male, age 76, both hemispheres 30.2
2246 Female, age 85, both hemispheres 28.3
2528 Male, age 74, both hemispheres 27.6
2531 Female, age 67, both hemispheres 26.0
Entorhinal gyrus
nTPM: 30.7
2613 Female, age 94, left hemisphere 34.2
2764 Male, age 80, right hemisphere 33.2
1787 Male, age 76, left hemisphere 30.2
1938 Female, age 85, left hemisphere 29.8
2686 Male, age 75, right hemisphere 28.6
2117 Female, age 91, right hemisphere 28.0
Hippocampus, CA1
nTPM: 30.4
2749 Male, age 80, left hemisphere 38.7
1873 Female, age 85, both hemispheres 30.6
2527 Male, age 74, both hemispheres 30.2
2082 Female, age 91, right hemisphere 27.6
2045 Male, age 76, both hemispheres 24.7
Hippocampus, CA2
nTPM: 30.5
1892 Male, age 76, both hemispheres 33.2
2437 Female, age 94, left hemisphere 32.5
1963 Male, age 80, left hemisphere 32.0
2249 Male, age 74, both hemispheres 31.1
2113 Female, age 91, right hemisphere 27.2
1940 Female, age 85, left hemisphere 26.7
Hippocampus, CA3
nTPM: 30.3
2137 Male, age 80, left hemisphere 32.3
2436 Male, age 74, both hemispheres 32.1
1867 Male, age 76, both hemispheres 31.5
2620 Female, age 94, left hemisphere 29.3
2861 Female, age 67, both hemispheres 28.5
1891 Female, age 85, both hemispheres 28.3
Parahippocampal cortex
nTPM: 29.6
1990 Female, age 91, right hemisphere 31.1
2693 Female, age 94, both hemispheres 30.5
2622 Female, age 67, right hemisphere 30.1
2245 Female, age 91, both hemispheres 29.8
2250 Female, age 67, right hemisphere 29.8
1933 Female, age 85, both hemispheres 29.5
2532 Female, age 72, left hemisphere 29.5
1850 Male, age 80, both hemispheres 28.8
2692 Male, age 74, both hemispheres 28.7
2018 Male, age 76, both hemispheres 27.8
Perirhinal gyrus
nTPM: 30.2
1794 Male, age 80, right hemisphere 32.4
1847 Female, age 91, left hemisphere 32.4
1841 Female, age 85, right hemisphere 29.7
2521 Female, age 94, right hemisphere 29.6
2848 Male, age 76, right hemisphere 27.0
Subiculum
nTPM: 30.2
1901 Male, age 80, both hemispheres 32.4
2619 Male, age 74, both hemispheres 31.6
1977 Female, age 85, both hemispheres 31.5
2438 Female, age 94, left hemisphere 30.9
2042 Male, age 76, both hemispheres 28.5
2729 Female, age 91, right hemisphere 26.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.9
Samples: 197

Max nTPM: 63.1
Min nTPM: 11.1
Std nTPM: 9.5
Median nTPM: 31.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 63.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 62.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 56.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 55.5
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 55.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 55.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 54.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 54.1
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 53.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 52.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 51.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.9
FF:10169-103B7 60 years, female 5.2
FF:10153-102I9 76 years, female 4.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 54.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 52.8
Samples: 4

Max nTPM: 66.8
Min nTPM: 37.7
Sample A Female 66.8
Sample B Female 54.5
Sample C Male 52.0
Sample D Male 37.7
Entorhinal cortex
nTPM: 51.2
Samples: 4

Max nTPM: 54.3
Min nTPM: 45.3
Sample A Female 51.2
Sample B Female 54.3
Sample C Male 54.0
Sample D Male 45.3
Subiculum
nTPM: 49.0
Samples: 4

Max nTPM: 61.9
Min nTPM: 41.7
Sample A Female 61.9
Sample B Female 44.0
Sample C Male 48.3
Sample D Male 41.7
Ventral hippocampus
nTPM: 54.1
Samples: 4

Max nTPM: 66.5
Min nTPM: 35.5
Sample A Female 58.1
Sample B Female 35.5
Sample C Male 66.5
Sample D Male 56.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.2
Samples: 4

Max nTPM: 65.6
Min nTPM: 55.6
Sample A Male 55.6
Sample B Male 58.8
Sample C Female 56.6
Sample D Female 65.6
Hippocampal formation
nTPM: 59.1
Samples: 4

Max nTPM: 64.8
Min nTPM: 53.3
Sample A Male 57.4
Sample B Male 53.3
Sample C Female 60.9
Sample D Female 64.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69549194 Antisense, RP_050120_01_H11, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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