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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:21.0 nTPM
HPA:21.0 nTPM
GTEx:12.9 nTPM
FANTOM5:34.5 Scaled Tags Per Million
Pig:22.7 nTPM
Mouse:29.7 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030212Antibody HPA030213Antibody HPA030214Antibody HPA030215Antibody CAB013496
Glial cells LowNot detectedLowMediumNot detected
Neuronal cells LowMedium-Not detectedNot detected











HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.0
Sample id Sample description nTPM
Hippocampus
nTPM: 18.3
2529 Female, age 94, left hemisphere 25.8
2148 Female, age 91, left hemisphere 18.7
1911 Female, age 85, right hemisphere 18.5
2621 Female, age 67, right hemisphere 18.0
1898 Male, age 80, left hemisphere 15.1
1855 Male, age 76, left hemisphere 13.6
Dentate gyrus
nTPM: 19.6
2530 Female, age 94, left hemisphere 26.3
2531 Female, age 67, both hemispheres 24.3
2010 Male, age 76, both hemispheres 22.5
2246 Female, age 85, both hemispheres 20.6
1927 Female, age 91, both hemispheres 12.0
2528 Male, age 74, both hemispheres 11.8
Entorhinal gyrus
nTPM: 21.0
2686 Male, age 75, right hemisphere 29.7
2613 Female, age 94, left hemisphere 24.6
2764 Male, age 80, right hemisphere 20.4
1938 Female, age 85, left hemisphere 19.1
1787 Male, age 76, left hemisphere 16.8
2117 Female, age 91, right hemisphere 15.3
Hippocampus, CA1
nTPM: 16.1
1873 Female, age 85, both hemispheres 20.0
2045 Male, age 76, both hemispheres 17.1
2527 Male, age 74, both hemispheres 16.1
2749 Male, age 80, left hemisphere 15.8
2082 Female, age 91, right hemisphere 11.4
Hippocampus, CA2
nTPM: 12.2
1963 Male, age 80, left hemisphere 15.3
2113 Female, age 91, right hemisphere 14.8
2437 Female, age 94, left hemisphere 13.8
1940 Female, age 85, left hemisphere 12.5
2249 Male, age 74, both hemispheres 9.7
1892 Male, age 76, both hemispheres 7.1
Hippocampus, CA3
nTPM: 18.5
2861 Female, age 67, both hemispheres 32.5
2620 Female, age 94, left hemisphere 25.4
1891 Female, age 85, both hemispheres 18.8
1867 Male, age 76, both hemispheres 12.6
2436 Male, age 74, both hemispheres 10.9
2137 Male, age 80, left hemisphere 10.5
Parahippocampal cortex
nTPM: 18.8
2622 Female, age 67, right hemisphere 29.5
2692 Male, age 74, both hemispheres 26.1
2018 Male, age 76, both hemispheres 21.3
2532 Female, age 72, left hemisphere 20.6
1990 Female, age 91, right hemisphere 17.5
1850 Male, age 80, both hemispheres 17.4
2693 Female, age 94, both hemispheres 17.2
1933 Female, age 85, both hemispheres 16.4
2245 Female, age 91, both hemispheres 15.4
2250 Female, age 67, right hemisphere 6.4
Perirhinal gyrus
nTPM: 12.2
2848 Male, age 76, right hemisphere 17.7
2521 Female, age 94, right hemisphere 14.2
1794 Male, age 80, right hemisphere 12.3
1841 Female, age 85, right hemisphere 10.0
1847 Female, age 91, left hemisphere 6.7
Subiculum
nTPM: 19.1
2042 Male, age 76, both hemispheres 22.7
2619 Male, age 74, both hemispheres 22.3
2438 Female, age 94, left hemisphere 20.7
1977 Female, age 85, both hemispheres 19.8
2729 Female, age 91, right hemisphere 14.7
1901 Male, age 80, both hemispheres 14.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.9
Samples: 197

Max nTPM: 28.6
Min nTPM: 4.8
Std nTPM: 3.9
Median nTPM: 12.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 28.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 26.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 23.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 22.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 22.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 22.3
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 21.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 20.7
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 20.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 20.0
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 19.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.5
FF:10169-103B7 60 years, female 40.8
FF:10153-102I9 76 years, female 28.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.0
Samples: 4

Max nTPM: 20.6
Min nTPM: 13.0
Sample A Female 20.4
Sample B Female 18.1
Sample C Male 20.6
Sample D Male 13.0
Entorhinal cortex
nTPM: 20.4
Samples: 4

Max nTPM: 22.1
Min nTPM: 19.0
Sample A Female 21.4
Sample B Female 19.0
Sample C Male 22.1
Sample D Male 19.2
Subiculum
nTPM: 22.7
Samples: 4

Max nTPM: 29.9
Min nTPM: 19.0
Sample A Female 29.9
Sample B Female 19.8
Sample C Male 22.0
Sample D Male 19.0
Ventral hippocampus
nTPM: 21.3
Samples: 4

Max nTPM: 29.1
Min nTPM: 16.7
Sample A Female 19.3
Sample B Female 16.7
Sample C Male 29.1
Sample D Male 20.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.7
Samples: 4

Max nTPM: 35.6
Min nTPM: 27.4
Sample A Male 28.3
Sample B Male 27.4
Sample C Female 27.4
Sample D Female 35.6
Hippocampal formation
nTPM: 24.6
Samples: 4

Max nTPM: 29.1
Min nTPM: 20.4
Sample A Male 20.4
Sample B Male 28.1
Sample C Female 29.1
Sample D Female 20.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
73423817 Antisense, RP_051019_03_A07, Mouse strain C57BL/6J (56 days, male) 2.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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