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SSBP4
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:78.6 nTPM
HPA:78.6 nTPM
GTEx:109.1 nTPM
FANTOM5:34.9 Scaled Tags Per Million
Pig:37.1 nTPM
Mouse:37.3 nTPM
Allen mouse:11.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 78.6
Sample id Sample description nTPM
Hippocampus
nTPM: 62.8
2621 Female, age 67, right hemisphere 77.5
2148 Female, age 91, left hemisphere 73.4
1911 Female, age 85, right hemisphere 62.6
2529 Female, age 94, left hemisphere 59.1
1855 Male, age 76, left hemisphere 52.2
1898 Male, age 80, left hemisphere 51.9
Dentate gyrus
nTPM: 67.0
2531 Female, age 67, both hemispheres 104.0
1927 Female, age 91, both hemispheres 72.7
2246 Female, age 85, both hemispheres 60.3
2528 Male, age 74, both hemispheres 58.3
2010 Male, age 76, both hemispheres 55.6
2530 Female, age 94, left hemisphere 51.3
Entorhinal gyrus
nTPM: 57.1
2613 Female, age 94, left hemisphere 69.0
2686 Male, age 75, right hemisphere 63.6
1787 Male, age 76, left hemisphere 59.4
1938 Female, age 85, left hemisphere 57.0
2764 Male, age 80, right hemisphere 53.7
2117 Female, age 91, right hemisphere 39.7
Hippocampus, CA1
nTPM: 64.6
2045 Male, age 76, both hemispheres 75.3
2082 Female, age 91, right hemisphere 73.8
2749 Male, age 80, left hemisphere 61.7
2527 Male, age 74, both hemispheres 56.9
1873 Female, age 85, both hemispheres 55.3
Hippocampus, CA2
nTPM: 54.8
1940 Female, age 85, left hemisphere 63.0
2113 Female, age 91, right hemisphere 60.3
1892 Male, age 76, both hemispheres 54.8
2249 Male, age 74, both hemispheres 51.6
2437 Female, age 94, left hemisphere 50.4
1963 Male, age 80, left hemisphere 48.6
Hippocampus, CA3
nTPM: 78.6
2861 Female, age 67, both hemispheres 112.3
2620 Female, age 94, left hemisphere 106.8
2137 Male, age 80, left hemisphere 77.6
2436 Male, age 74, both hemispheres 64.3
1867 Male, age 76, both hemispheres 62.0
1891 Female, age 85, both hemispheres 48.7
Parahippocampal cortex
nTPM: 55.5
2622 Female, age 67, right hemisphere 74.1
2245 Female, age 91, both hemispheres 59.8
2693 Female, age 94, both hemispheres 59.4
2532 Female, age 72, left hemisphere 57.9
1933 Female, age 85, both hemispheres 56.2
2250 Female, age 67, right hemisphere 54.4
2018 Male, age 76, both hemispheres 52.2
1990 Female, age 91, right hemisphere 48.1
2692 Male, age 74, both hemispheres 47.2
1850 Male, age 80, both hemispheres 45.4
Perirhinal gyrus
nTPM: 56.4
1847 Female, age 91, left hemisphere 60.4
2521 Female, age 94, right hemisphere 59.5
2848 Male, age 76, right hemisphere 55.8
1841 Female, age 85, right hemisphere 54.3
1794 Male, age 80, right hemisphere 52.3
Subiculum
nTPM: 47.3
2729 Female, age 91, right hemisphere 54.8
1977 Female, age 85, both hemispheres 53.5
2042 Male, age 76, both hemispheres 47.6
1901 Male, age 80, both hemispheres 46.6
2619 Male, age 74, both hemispheres 44.0
2438 Female, age 94, left hemisphere 37.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 109.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 109.1
Samples: 197

Max nTPM: 277.5
Min nTPM: 19.5
Std nTPM: 46.5
Median nTPM: 105.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 277.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 264.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 232.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 218.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 218.4
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 209.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 205.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 204.0
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 191.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 187.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 186.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.9
FF:10153-102I9 76 years, female 36.4
FF:10169-103B7 60 years, female 33.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 36.1
Samples: 4

Max nTPM: 43.0
Min nTPM: 31.5
Sample A Female 43.0
Sample B Female 37.9
Sample C Male 31.5
Sample D Male 31.8
Entorhinal cortex
nTPM: 37.1
Samples: 4

Max nTPM: 42.0
Min nTPM: 33.2
Sample A Female 38.8
Sample B Female 33.2
Sample C Male 42.0
Sample D Male 34.3
Subiculum
nTPM: 33.4
Samples: 4

Max nTPM: 44.9
Min nTPM: 26.6
Sample A Female 44.9
Sample B Female 29.7
Sample C Male 32.2
Sample D Male 26.6
Ventral hippocampus
nTPM: 36.1
Samples: 4

Max nTPM: 42.7
Min nTPM: 29.2
Sample A Female 30.0
Sample B Female 29.2
Sample C Male 42.3
Sample D Male 42.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.8
Samples: 4

Max nTPM: 43.0
Min nTPM: 28.8
Sample A Male 37.7
Sample B Male 43.0
Sample C Female 33.6
Sample D Female 28.8
Hippocampal formation
nTPM: 37.4
Samples: 4

Max nTPM: 41.2
Min nTPM: 34.1
Sample A Male 34.1
Sample B Male 40.0
Sample C Female 34.1
Sample D Female 41.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.9
73817987 Antisense, RP_051214_01_B01, Mouse strain C57BL/6J (56 days, male) 13.0
68076537 Antisense, RP_040923_02_E08, Mouse strain C57BL/6J (56 days, male) 10.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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